Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_0907 |
Symbol | |
ID | 4876649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 982498 |
End bp | 985740 |
Gene Length | 3243 bp |
Protein Length | 1080 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640138219 |
Product | DNA helicase/exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_001069207 |
Protein GI | 126433516 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00623789 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCATTCC ATCTGCACCG GGCGGAGCGC ACCGACCTCC TGGCCGACGG ACTCGGTGCC CTGCTGTCCA CTCCCCTGGC CGACCCGTTC GCCGAGGAGC TCGTGCTCGT CCCGGCGAAG GGCGTCGAGC GGTGGCTGAG CCAGCGGCTC TCGCACGTCC TCGGCCGCGG TTCCGGCGAC GACGGGGTCT GCGCGGGCAT CACATTCCGC AATCCGCGGT CCCTAATCGC CGACATTACC GGCACCCGGG ACGACGACCC CTGGGCCCCC GACTCGCTGG TCTGGCCGCT GCTCGAGGTC ATCGACGACA ACCTCGACCA ACCGTGGTGC ACCACGCTCG CCACCCACCT CGGCCATTTC GAACACGGCG AGGAGCAGGA GCTCCGCCAG AGCCGCCGCT ACGCCGTCGC CCGCCGTCTC GCCGGCCTGT TCGCCTCCTA CGCCCGCCAG CGCCCCGGAC TCCTCGTCGA CTGGCTCGCC GGCGACCCCG CAGACCTCGA CGACGACCTG CACTGGCAGC CGCATCTCTG GCGACACCTC GTCGACCGCG TACCCGCCGA CCCACCGCAC ATCCGGCACG CCAAAACCGT TGCCCGCCTT CATGAGTCAC CCAGCGACCT GCCCGAACGG CTGTCGCTGT TCGGCCACAC CCGGCTGCCC TCCACCGAGG TCGAACTGCT CGACGCGCTC GCCACCCACC ACGATCTGCA CCTGTGGCTG CCGCACCCCA GCGACGACCT GTGGACCACC CTCGAACCCC ACCGCGGCGC CGTGCGCCGC CGCGAGGACA ACACCCACCG CGAGGTCGGC CACCCGCTGC TCGCCACCCT CGGCCGCGAC CTGCGCGAAC TGCAGCGCAG CCTGCCCGAC GACGCGCAGA CCGACGAGTA TCTGGGCACC GCCGACCACC CCGACACCCT GCTCGGCTGG CTGCAGTCCG ACATCGCCGC CAACGCGGTC CGCCCCGACG GCCGCCGACT GCACGACCAC GACCGCTCGG TCCAGGTGCA CAGCTGTCAC GGCGCCGCCC GCCAGATCGA CGTCCTGCGC GAGGTGCTGC TCGGCCTGCT GGTCGACGAC CCGACTCTCG AACCCCGCGA CATCCTTGTC ATGTGCCCGG ACATCGAGCA CTACGCACCG CTGATCGTCG CCGGCTTCGG CCTCGGCGAC GTGATCCACG GTGCGCACCC GGCCCATCGG TTGCGCGTCA AACTCGCCGA CCGCGCGCTC ACCCAGACCA ACCCGTTGCT GGGCGTCGCC GCCCAACTCC TCGCGCTCGC CGGCGGCCGC GCCACCGCCA CCGAGGTGCT CAACCTCGCC GAGGCCCCGT CGATCCGGGC GCGGTTCACC TTCAGCGACG ACGACCTCGA CGCGATCGGC GACTGGGTAC GCGAGGCCAA CATCCGGTGG GGGTTCGACC GCGAGCACCG CCACCCCTAC GGCGTCGACT TCGTCCAGAA CACCTGGCGT TTCGGACTCG ACCGGGTGCT CGCCGGCGTC GCCATGTCCG ACGACTCGCA CGCCTGGCTC GACACCACGC TGCCCCTCGA CGACGTCGGC AGCGACCGCG TCGAACTCGC CGGCCGCCTC GCCGAATACG TCGACCGACT GCAGCATTGC GTCGAAAACC TCAGCGGCAC AAGGCCACTC CATGAATGGC TCGATGCGCT GCGCACCGGT ATCGACCAGC TGACCAGCGT TCCAGACGAC GACACCTGGC AGACCAGCCA ACTGGAGCGC GAGTTCGCCG ACGTCCTCAC CCAGGCCGGC CCCCGCAAAG ACACCCTGCT GCGCCTGCCC GACGTCAAGG CCCTGCTCGA CCGCCACCTC GCCGGACGGC CCACCCGGGC CAACTTCCGC ACCGGCACGT TGACGGTGTG CACGATGGTG CCGATGCGTT CGGTCCCGCA CCGGGTGGTG TGCCTGGTGG GTCTCGACGA CGGGGCGTTC CCGCGCCTGG GCGTGGTCGA CGGCGACGAC GCACTGGCCC GCGACCCGAT GACCGGTGAA CGCGACATCC GCTCGGAGGA CCGCCAACTG CTGCTCGACG CGATCGGCGC GGCGACGGAG AGGCTTGTCG TCACCTACAC CGGCGCCAAC GAGTACTCCG GGCAGCGCAA ACCCCCGGCG GTGCCGCTGG TCGAATTGCT CGACGCACTC GACGTCACCA CCGAGGCCCC GGTCCGCGAG CAGATCCTCG TCGAACATCC GTTGCAGCCC TTCGACGTTC GCAACGTCAC CCCGGGCGCA CTCGGCGTAC CCGGCACACC GTTCACGTTC GACTCGACGG CGCTGACCGC CGCGACCGTC GCGTCCGGGG ACCGCGCCGA GCGGCCGGGT CTGCTCACCC ACCCGCTGCC CGCGCCTCCG GAGGACGACG TCGCGCTCGA CGACCTGATC GGCTTCTTCA AGGATCCGGT CAGGGGGTTC TTCCGGGCGC TGGACTTCAC GCTGCCGTGG GACGTCGACG CCGTCGAGGA CGCCATGCCG GTGGAGATCG ACGCGCTGGC CGAATGGCAG GTCGGTGAAC GGATGCTCGA TGACATGCTG CGCGGCCTCA ATCCCGAACA GGCCCAACAG GCGGAGTGGC GGCGCGGTTC GCTGCCGCCC GGCCGACTCG GCTGGCGCAA GGCGCAGGAG TTGCGCGATC AGGCCGCCGC GCTGGCCACC GCGGCGCACC GGCACCGACG GCAACCGCCC CGGGCGTATG ACGTCGACAT CCACCTCGGT GGCGGCCGCC GCGTCACCGG CACGGTCCCG AAGGTGTACG GCGACCGCAC GGTCACCGTC ACGTACTCCA AACTCGACGG CCGCCACCTG CTGGCGTCGT GGATCCAGTT GGCGGCGTTG AGCGCTCAAA TGCCCGGTAC GGACTGGGCG GCGGTGTGCA TCGGCCGCCC GAAGCGGGGC ACCACCCCGC GGGAACGGAT GCTCGGCGCG CCCGGGGATG CCGCCGGCGT GCTGCAGGAT CTGGTGAACA TGTACGACGC GGGGCGGCGT GAGCCGATTC CGTTGCCGCC GAAGACGTCC TATGCGTGGG CCGAGGCGCG TCACAGTCGT GGAGACGCGG AGCGGGAGGC GCGGTACCGC TGGAAGTCGG ACCGCTACCC GGGTGAGGAC GCCGAACCGG CCAACGTACG GGTGTGGGGG GCGCACGCCC CGCTGGACAC CCTGCTCGCG GCGGGCATGG ACGGCTACGC CGGACGCCTG TGGCTGCCGA TGCTGGAAGC CGAGAGGGAC TGA
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Protein sequence | MPFHLHRAER TDLLADGLGA LLSTPLADPF AEELVLVPAK GVERWLSQRL SHVLGRGSGD DGVCAGITFR NPRSLIADIT GTRDDDPWAP DSLVWPLLEV IDDNLDQPWC TTLATHLGHF EHGEEQELRQ SRRYAVARRL AGLFASYARQ RPGLLVDWLA GDPADLDDDL HWQPHLWRHL VDRVPADPPH IRHAKTVARL HESPSDLPER LSLFGHTRLP STEVELLDAL ATHHDLHLWL PHPSDDLWTT LEPHRGAVRR REDNTHREVG HPLLATLGRD LRELQRSLPD DAQTDEYLGT ADHPDTLLGW LQSDIAANAV RPDGRRLHDH DRSVQVHSCH GAARQIDVLR EVLLGLLVDD PTLEPRDILV MCPDIEHYAP LIVAGFGLGD VIHGAHPAHR LRVKLADRAL TQTNPLLGVA AQLLALAGGR ATATEVLNLA EAPSIRARFT FSDDDLDAIG DWVREANIRW GFDREHRHPY GVDFVQNTWR FGLDRVLAGV AMSDDSHAWL DTTLPLDDVG SDRVELAGRL AEYVDRLQHC VENLSGTRPL HEWLDALRTG IDQLTSVPDD DTWQTSQLER EFADVLTQAG PRKDTLLRLP DVKALLDRHL AGRPTRANFR TGTLTVCTMV PMRSVPHRVV CLVGLDDGAF PRLGVVDGDD ALARDPMTGE RDIRSEDRQL LLDAIGAATE RLVVTYTGAN EYSGQRKPPA VPLVELLDAL DVTTEAPVRE QILVEHPLQP FDVRNVTPGA LGVPGTPFTF DSTALTAATV ASGDRAERPG LLTHPLPAPP EDDVALDDLI GFFKDPVRGF FRALDFTLPW DVDAVEDAMP VEIDALAEWQ VGERMLDDML RGLNPEQAQQ AEWRRGSLPP GRLGWRKAQE LRDQAAALAT AAHRHRRQPP RAYDVDIHLG GGRRVTGTVP KVYGDRTVTV TYSKLDGRHL LASWIQLAAL SAQMPGTDWA AVCIGRPKRG TTPRERMLGA PGDAAGVLQD LVNMYDAGRR EPIPLPPKTS YAWAEARHSR GDAEREARYR WKSDRYPGED AEPANVRVWG AHAPLDTLLA AGMDGYAGRL WLPMLEAERD
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