Gene Mjls_0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0821 
Symbol 
ID4876564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp880181 
End bp881878 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content61% 
IMG OID640138134 
Productputative helicase 
Protein accessionYP_001069122 
Protein GI126433431 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAATT ACGACCTCCC ATGGAACCCG AATCGCATTG AGCAACGGTT CGGCCGTATA 
CACCGGATCG GTCAGAAGAA TGTCTGCCAA CTCTGGAACA TGGTCGCGCG GGACACTCGC
GAAGGCGAAG TGTTCCGGCG TCTCCTCGAC AAGATTCAAG AGCAACGAGC TGCGTACGGC
GGCAAGGTCT TCGACGTCCT CGGAACCCCG ATGGTGAACA TCAAGCTCGC CGACCTCCTC
CGAGATGCGA TTCGCTACGG AGAGCGAGAA GAGGTGCGGC AGCGGATGCA GAAGACGATC
GACGCAGGCA TCGTCGAAGG CCTCCAAGAG CTCATCGCTG ATCACGCCCT CACGCACGAC
GTTCTGCCGC CGGACGATCT TGACAAGCTC CGAGAGGAAA TGGAGGAAGC ACGCGCCCGA
CGCCTGCAGC CTCACTTCAT CCGTGACGCA TTCACGGAGG CGTTCCGACA ACTGGGCGGA
CGAATCGACA CCCGCGAAAA GGAACGGTAT GAGATCACGC ATGTGCCGCC GCGGATACGT
GAGTCTACGA GAGCTCCTAT CGCTCGCCGC TATCACCGCG TGAGCTTTGA CCTGACAAAG
CTCGAAGGGC CAGGCGTCGA GCGCGCCGAG CTCCTAGCGC CCGGTCACCC ACTTCACGAT
GCGGTACTTC GCCTCACCGT CGACCGGCTC CAGGACGCGC TCGAGCACGG CACGGTTCTG
GAAGCCGACA ATATCGAAGA GCCGTCGCTT CTAGTGGGTG TGCTGAACGC CGTGCGGGAC
GCAACGGGCA CGACGATCGC ACGAGGCTTC GGATACGTAG TCACCGACGC CAAAGGGGCG
GTTGTCGACG CTGGACCAGC CCCCTATCTG GATTACAAGT CTCCTGTGGG ACCGAGGATC
GAAGACGAGT CATGGCTTGC GCAGGCTGAA GCTACCGCTA CTTCATGGGT GATCGCCCAC
CAGTTACCTT CATTCGCCGA ACATGCCGTC TCACGTAGGA CGACCGAGTA CGAACGCCTC
ACTGCCGCAG TGAAGGAACG ACTAGGGCGT GAGATCAGCC GTCTTGAAAC AGAGGCGTCT
CGCACCGACT CAGCCGCCGA GGACGGGAGG CGTGTCCGCA CTTCTGGGGA TGCATTACGC
CGGCGGGCCG ACGACTTGAT TGCGCGCCTC GAGCTACGGC TTGCGCAGAT CGATAGACAA
CTCCGAATGA ACCCACTGCC GCCGAGAATC GTTTCGGCGG CGCTCGTCAT GCCGGCACCC
ACGGCCAATT CAGGACCCTC GACGCCCGTC GACGCCGCAA ACCGTAAAGC CATCGAGCGT
AGAGGCATCG AGGCGGTACT CGCGGCGGAG CGTTCGCTCG GTCGCACTCC TGTCGAACAG
CCTTTCAATA ACCCCGGTTT CGACATACTG TCCGAACGCG CCGGGGACGT GAATCTGCGG
ATCGAAGTCA GAGCGCGCAT TACGGGAGCC GACACGTTCA CCATCACCCG TACCGAGGTT
CTGCTCGCGC TCAACGCCGC TCCAAATCAC CGACTTGCGC TGGTATCAGT ACACCCGGAC
GGACCTCACC TCGATGAAGT ACGCTACATC GCGAACGTGT TCTCCGGTTC AGAACCCGCC
TGGCTCAACG AATTCGGCGT CGTGAGCCAA AACCTCTCTT GGACTCATTA TTGGGAGACC
GGATCTGCAC CGTTCTAA
 
Protein sequence
MVNYDLPWNP NRIEQRFGRI HRIGQKNVCQ LWNMVARDTR EGEVFRRLLD KIQEQRAAYG 
GKVFDVLGTP MVNIKLADLL RDAIRYGERE EVRQRMQKTI DAGIVEGLQE LIADHALTHD
VLPPDDLDKL REEMEEARAR RLQPHFIRDA FTEAFRQLGG RIDTREKERY EITHVPPRIR
ESTRAPIARR YHRVSFDLTK LEGPGVERAE LLAPGHPLHD AVLRLTVDRL QDALEHGTVL
EADNIEEPSL LVGVLNAVRD ATGTTIARGF GYVVTDAKGA VVDAGPAPYL DYKSPVGPRI
EDESWLAQAE ATATSWVIAH QLPSFAEHAV SRRTTEYERL TAAVKERLGR EISRLETEAS
RTDSAAEDGR RVRTSGDALR RRADDLIARL ELRLAQIDRQ LRMNPLPPRI VSAALVMPAP
TANSGPSTPV DAANRKAIER RGIEAVLAAE RSLGRTPVEQ PFNNPGFDIL SERAGDVNLR
IEVRARITGA DTFTITRTEV LLALNAAPNH RLALVSVHPD GPHLDEVRYI ANVFSGSEPA
WLNEFGVVSQ NLSWTHYWET GSAPF