Gene Mjls_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_0626 
Symbol 
ID4876370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp683487 
End bp684023 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID640137939 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001068928 
Protein GI126433237 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.459666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.287262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGTA TCGCACCCGG CGGATTCCGG GAACTGGGAC CCCTGAACTG GGCCATCGCG 
AAGGCGGGTG CCCGTGCCAT CCGCGCGCCG CGCTTCAGCC TGTTCAACGT GCTCGGCCAA
CACCGTCTGC TGTTCCTGGC GTTCCTGCCC TACAGCGGTG TGCTGCTCGG CCGCCTCGGC
AAGCTGTCCC GTCAGGACGC CGAACTCGTG ATCCTGCGGG TCGGCCATCT GCGCGAGTGT
GAGTACGAAC TGCAGCAGCA CCGCCGGCTG GCCCGCAGCC GCGGCGTCGG CGCGGACCTT
CAGGCCCGGA TCTTCGAGGG CCCCGACGCC GAGGGTCTCA CCGACCGGCA GCGGGTGCTC
GTCACCGCCA CCGACGAGTT CGTCGTCACC CGAGGGGTGT CACCGCAGAC GTGGTCGGTG
CTGGCCCGGC ATCTCACCAA ACCTCAGCTC ATCGAATTCT GCCTGCTGGC AGCGCATTAC
GACGGTCTGG CGGCGACGAT CAGCACGCTG CAGGTGCCGC TCGACTTCCC GGACTAG
 
Protein sequence
MTRIAPGGFR ELGPLNWAIA KAGARAIRAP RFSLFNVLGQ HRLLFLAFLP YSGVLLGRLG 
KLSRQDAELV ILRVGHLREC EYELQQHRRL ARSRGVGADL QARIFEGPDA EGLTDRQRVL
VTATDEFVVT RGVSPQTWSV LARHLTKPQL IEFCLLAAHY DGLAATISTL QVPLDFPD