Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_0556 |
Symbol | |
ID | 4876301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 612422 |
End bp | 615181 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640137870 |
Product | regulatory protein, LuxR |
Protein accession | YP_001068859 |
Protein GI | 126433168 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.108557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCTGC AGCTCATCAG CCGCGACGCG GAGTTGAGCG CTGTCGACGA CCTGCTCTCC GCAGTGCCGA CGGGTACCTG CGTGCTGGTG CTCGAAGGCG ATGTCGGGAT CGGTAAGAGC ACCGTGTGGC GCGCAGGCAT CGAACGCGCC CGGACCCGCG GCTTCCGGGT GCTCGCGGCG CACCCGGTGT CCAGCGAGTC GGTGGCCGCG TACTCATCGC TGGCCGAACT GCTCGCCGAT GTGGACACCG AGGTGCTGGA CCACCTGCCC GCCCCGCAAC GAGTCGCGAT CGACCGGGTC CTCTCTCGCG CCGACGACAC GGGACCCGGC ACCGATCAAC GCGCGGTGGC CGCCGCCGTC CGGTCGGTGC TCGAACGGCT GGCCCACGAC AGTCCCGTCC TCGTCGCGAT CGACGATCTG CAGTGGCTCG ACCCGCCGAC CGCCGCCGTT CTCGCGTCGG TGGCCCGCCG GTCCGCGGGC GCCATCGGTT TCCTCGTGAC CGTGCGCTCC GGCGCAGGCG ACCACACCGA GACGCTGCTC GAACCGTCGC GTCCGGAGCG TCTGCACCGG GCCCGGGTGC ATCCGATGAC GGTCGGGGGC CTGCACGCCA TGATCAGCCA CCAGCTGGGC CGGTCGCTGA CCCGCCCGAG AATGGACTGG GTGTACGAGG TTTCGGCCGG AAACCCGCTC TACGCCCTCG AATTGGCGCG GGCACTGGAC CGGGACGCCA CCGGTGTCGG GCCGCTGCCG GCCACCCTCG CCGATCTGGT GCGGACACGC ATCTCCGGTT TGCCCGACCA CACCCGGGAG GTCCTCCTCG CCACCGCCTG TATCGCGTCG CCCACCGTGG ACCTGGTGGC GCGCGCCGTC GGCGACAACG TCGAGTGGAC CGTCGCGGCT CTCGAGGAGG CCGAACGGCA CGGCGTCGTC GAGATCACCG GCTACAAGGT GACTTTCAGC CATCCCCTGT TGGCCCGTGG CGTGTACGCC GAGGCGTCCG CGGACGAACG GCGGTGGATG CACCGCCGGT TGGCCGACAT CGTCGAGAGC CCTGAGTCCC GGGCCCGGCA CCGCGCCCTC TCGAGTGACG GCGCCGACGA GCAGACGGTC AAGGCGCTCG ACGAGGCGGC CGAATCGGTC CACCTGCGCG GCGCACCCGC GACCGCCGCC GAACTGCTCG ACATGGCCCG TGCCCGCGGG GGTGACACCC CTGAACGCAC GCTGCGTGCC GCGGCCTGCC ACTTCGAGGC GGGTGATGCC GCGCGGGCAC GAGTGTTGTT GGAACACGCC CTTTCCGAGA TCCCGCCGGG TGAGCTGCGG GCCCGGGCGC TGCAGCTGCT CGGTCTGGTA CGGCTCTACG CCAACAGTTC GTCCGAGGCG GTGCCGATGC TCGAACAGGC CATCGCCGAG CCGGGCGTCA ACCCGGACCG CCGGGTGCAC ATGCTCGTCA TGTTGGCGTT CATCGAGTTC AACGCGGGGC GCGCGGACCG GGCGGTGCAG CGCGCGGAAG AAGCCGTGAC ACAGGCGATG ACACTGCATC GGCCGGATCT GATCACCCAG GCCAAGCCGA TTCGCGCGCT GCTGCGGTTC CTGCTCGGCG AGGGTTTCGA CGAGGCTGAA CTCGACGGCG TGTTCGATTT CGACGAGCCC GAGGGCCTAC CGCTGGCCGC GCAGCCGAGG ACCCTGCACG CCCTGCTGAT GTTGTGGACC GACCGGCTCG ACGAGGCCGC CGACCAGTTC AACGCGATCG CACAGCGCTG CATCGAACGG GGCGACGAAA GCGAGCGGGC GTTCGTCGAC TTCCACCTCG GGCAGGTCAA CGTCTGGCGG GCCGACCTCG CGGCTGCGGA ACGGGTCGCC GAGGACAGCG TCGAGCGGGC GTTGCAGTCC CACGGTGACC TGCCGCTGTT CGTCGCGTTG ATCGTGCGGG TGATGGTGAG TGCCCACTTC GGCCGCGAGG ACCAGACGCG CCGGTTCGCC GCCCAGGCGC GGACGGTCGG GGAGCGGTGT GAGTCCAGCC GTCTCGGGGT GTGGCTGACT ACGAGCCTGG GTTTCCTCGA GTTGTCGCTG GGCGACCACC GGGCCGCGGT GGACGTGTTG AGTCCGGCGG TCGAGGGCTG GTCGTCGGCG GCGACCGGGA TCCCGGCGCC CACCGAACTC GTCACGGCGC CGTTCCTGCC GGACGCGGCG GAGGCGCTCA TCGGCATCGG CAGCCTCGAT GAGGCGGAAC GGCTCGTCGA GGCGTTGGAG GCCAACGGAA CCCGCCTCGA CCGGCCGTGG ATGCTCGCCC TCGGTGCGCG CTGCCGGGCG CTGCTGCTCG CCGCACGCGG TGACCTGACC GCCGCCGTCA GCTCCGGTGA GCGCGCGTTG ACCGAACACG GCCGGCTGTC GATGCCGTTC GAACTCGCCC GCACCCAACT CGTGGTCGGC CGGTTGCAGC ACCGGCGGCG CCAGTACGAC GCCGCCACCG CCATCGTCTC GACCGCTCTC GCGGCGTTCG AGCGCATCGG GGCGGAGCTG TGGGCGCGGC AGGCCCGCGC CGAACTCGAC GCGCTGACCG GTAGGCAGAC CGCGGCCGGC CTCGCCGAAT CCGAGCGCCG CTTCGCCGAT CTCGCCGTGC AGGGGATGAC GAACCGTGAG ATCGCCGCGA CGCTGTACGT GAGTGAGAAG ACGGTGGAGG CCAACCTGTC GCGCGTCTAC CGCAGGCTGG GCATCCGTTC CCGCGGCGAG CTCGCCAGGG TGCTCAACGC CGACTCCTGA
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Protein sequence | MPLQLISRDA ELSAVDDLLS AVPTGTCVLV LEGDVGIGKS TVWRAGIERA RTRGFRVLAA HPVSSESVAA YSSLAELLAD VDTEVLDHLP APQRVAIDRV LSRADDTGPG TDQRAVAAAV RSVLERLAHD SPVLVAIDDL QWLDPPTAAV LASVARRSAG AIGFLVTVRS GAGDHTETLL EPSRPERLHR ARVHPMTVGG LHAMISHQLG RSLTRPRMDW VYEVSAGNPL YALELARALD RDATGVGPLP ATLADLVRTR ISGLPDHTRE VLLATACIAS PTVDLVARAV GDNVEWTVAA LEEAERHGVV EITGYKVTFS HPLLARGVYA EASADERRWM HRRLADIVES PESRARHRAL SSDGADEQTV KALDEAAESV HLRGAPATAA ELLDMARARG GDTPERTLRA AACHFEAGDA ARARVLLEHA LSEIPPGELR ARALQLLGLV RLYANSSSEA VPMLEQAIAE PGVNPDRRVH MLVMLAFIEF NAGRADRAVQ RAEEAVTQAM TLHRPDLITQ AKPIRALLRF LLGEGFDEAE LDGVFDFDEP EGLPLAAQPR TLHALLMLWT DRLDEAADQF NAIAQRCIER GDESERAFVD FHLGQVNVWR ADLAAAERVA EDSVERALQS HGDLPLFVAL IVRVMVSAHF GREDQTRRFA AQARTVGERC ESSRLGVWLT TSLGFLELSL GDHRAAVDVL SPAVEGWSSA ATGIPAPTEL VTAPFLPDAA EALIGIGSLD EAERLVEALE ANGTRLDRPW MLALGARCRA LLLAARGDLT AAVSSGERAL TEHGRLSMPF ELARTQLVVG RLQHRRRQYD AATAIVSTAL AAFERIGAEL WARQARAELD ALTGRQTAAG LAESERRFAD LAVQGMTNRE IAATLYVSEK TVEANLSRVY RRLGIRSRGE LARVLNADS
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