Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_0488 |
Symbol | |
ID | 4876233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | - |
Start bp | 540851 |
End bp | 541537 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640137802 |
Product | short chain dehydrogenase |
Protein accession | YP_001068791 |
Protein GI | 126433100 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.249212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCG AAAACGTCGT AGCCCTGGTG AGCGGGGCCA ATCGCGGACT GGGTCGGCAC TTCGCCGAAC AACTCATCGC CCGGGGCGCC AAGGTCTACG CGGGCGCCCG TAAACCCGAG ACCGTCGACC TGCCCGGCGC GATACCGGTG CAACTCGACA TCACAGATCC CGAATCCATC AGGCGCGCTG CGGAGTTCGC GGCCGATGTC AACGTCGTCA TCAACAACGC CGGCGTCTCG ACGCAATCCA CTCTGCTCGA CGGATCACTC GACGACATCC GGCTGGAGAT GGAGACGCAC TACTTCGGCA CGCTGCAGGT GCTCCGGGCG TTCGCCCCGA TCATCGAACG TAACGGCGGA GGGGCCGTCC TCAACGTGCT GTCGGTGTTG TCGTGGTTCC ATCCGCCGAC CAGCGGTGCC TACTCGGCCG CGAAGGCCGC GGCCTGGGCG CTGACCGACG CGGTGCGAAC AGAGTTGGCG CCAAAGGGAA TTCACGTCGC CGCACTGCAC GTCGGCTACA TGGACACCGA TATGGTCAGC TACATCCCCG CCGACCAGAA GTCCGACCCG GGTGCCATAG CGGAACTCGC GCTCGACGGC CTGTTCGCCG GTGAGAACGA GATCCTCGGC GACGCGTTGA CCCGCGACGT GAAGGCGGCG CTGTCGGGGG CGCCACGTCA GCGGTAG
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Protein sequence | MNTENVVALV SGANRGLGRH FAEQLIARGA KVYAGARKPE TVDLPGAIPV QLDITDPESI RRAAEFAADV NVVINNAGVS TQSTLLDGSL DDIRLEMETH YFGTLQVLRA FAPIIERNGG GAVLNVLSVL SWFHPPTSGA YSAAKAAAWA LTDAVRTELA PKGIHVAALH VGYMDTDMVS YIPADQKSDP GAIAELALDG LFAGENEILG DALTRDVKAA LSGAPRQR
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