| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0472 |
|---|
| Symbol | |
|---|
| ID | 4876217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 522724 |
|---|
| End bp | 524301 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640137786 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001068775 |
|---|
| Protein GI | 126433084 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.931968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC GCTGGCTCGC CCTGAGCGTG CTCACCCTGG CGGTCCTCGT CATCGGCATC
GACGGCACCG TGCTGGCGCT GGCGACACCG TTCATCAGCA GCGACCTGCA CACCTCCGCC
ACCGAACTGC TGTGGATCGG CGACATCTAC TCGTTCGTGC TCGCCAGCCT GCTGATCACA
ATGGGCAGTC TCGGTGACCG CATCGGCCAC CGCAGGCTGC TGCTCTGTGG GGCAACGCTT
TTCGCCGCCG TCTCCGTCGT CACCGCCTAC GCCCCCACCG CAGAGGCGCT GATCGGCGCC
CGCGCACTGC TCGGCGTCGC AGGCGCGACA CTGGCCCCGG CCACCCTCGC GCTGATCCGC
GGGATCTTCG CCGACGCCCG GCAGCGCTCC ATGGCCGTCG GTATCTGGGC GGCGGCGTTC
TCCGCGGGCG CCGCACTCGG CCCCATGGTG GGCGGTGTTC TGCTCGAACA CTTCTGGTGG
GGTTCGGTGT TCCTCATCAA CGCACCCGTG ATGGCCGTGC TGGTGATCGG TGGGCTCACC
CTGCTGCCCG AACATCGCAA TCCCGAACCG GGCCCGTGGG ATCTGCCCAG CGTCGGGTTG
TCGATGCTCG GCATCCTGAG CGTGGTCTAC GCGATCAAGG AGACCGCGGC ACACGGTCCG
CGGCTCAGCG CCCTGGCGAC CGCGGTGGTC GGCGTCTCCG CACTGACGGT GTTCGTCCGC
AGGCAGCTGC GGCTGCCCAG CCCGCTCATC GACGTCCGGC TGTTCGGCAA CCGGGCGTTC
TCGGGTGTGG TCGGGGCGAA TCTGCTGTCC GTGCTGGGCC TTTCGGGGCT GGTGTTCTTC
CTCTCGCAGT ACTTCCAGCT GGTGCAGGGG TACAGCCCGC TGGGCGCCGG ACTGGCCGAG
CTCCCCGCGG CGGTCACCGC GACGGTGTTC GGTGTGCTGG CCGGGTTCGC GGTACGCCGC
TGGACTCAGC GCGCCGTGCT CACCACCGGG CTCGCCCTGG TCGGTGTCGC GATGGCCACG
CTCACCACGA TCCACCCGAC GTCACCGTAT CCGCACCTCG GCATCGCGCT GTTCGTCGTC
GGTGTCGGAC TGGGGCTGGC GTTCACCGTG GCCAGCGACG TCATCCTGGC CAGCGTTCCC
CGCGAACGCG CCGGGGCGGC GGCCGCCGTC TCGGAGACCG CCTACGAACT CGGGATGGCG
CTGGGCATCG CCGTCGTCGG TTCGATTCTC ACCGGGGTGT ACCGCACCCT CGTCGTGCCG
CCGGGCCTTT CGCCCGCCGC GGCGACGCAG GCCCGCGATT CGCTGGCCGC CGCCACCGAC
GTCGCCGCCG GACTGCCGCC CGCCCAGGCC GGCGCACTGC TCGACGCGGC GCGCGAATCG
TTCAGCAGCG GACTGGCGGT CGCCTCCGGT GTCGGCGCGG CGCTGATGCT GACCTCGGCG
GTGACGGTGT GGGTGCTGCT GCGTGAGCGG CTACCACGCC TTGCCGAGGT CGGCGTGCTG
AACGATCCAG GTGTGCATGG CGATGCCGGC GGCGACGGCC GCGTTGATAC TGCGTGTGGA
GCCGAACGCG GCAATTGA
|
|---|
| Protein sequence | MTRRWLALSV LTLAVLVIGI DGTVLALATP FISSDLHTSA TELLWIGDIY SFVLASLLIT
MGSLGDRIGH RRLLLCGATL FAAVSVVTAY APTAEALIGA RALLGVAGAT LAPATLALIR
GIFADARQRS MAVGIWAAAF SAGAALGPMV GGVLLEHFWW GSVFLINAPV MAVLVIGGLT
LLPEHRNPEP GPWDLPSVGL SMLGILSVVY AIKETAAHGP RLSALATAVV GVSALTVFVR
RQLRLPSPLI DVRLFGNRAF SGVVGANLLS VLGLSGLVFF LSQYFQLVQG YSPLGAGLAE
LPAAVTATVF GVLAGFAVRR WTQRAVLTTG LALVGVAMAT LTTIHPTSPY PHLGIALFVV
GVGLGLAFTV ASDVILASVP RERAGAAAAV SETAYELGMA LGIAVVGSIL TGVYRTLVVP
PGLSPAAATQ ARDSLAAATD VAAGLPPAQA GALLDAARES FSSGLAVASG VGAALMLTSA
VTVWVLLRER LPRLAEVGVL NDPGVHGDAG GDGRVDTACG AERGN
|
|---|
| |