| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0393 |
|---|
| Symbol | |
|---|
| ID | 4876139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 435872 |
|---|
| End bp | 437113 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640137707 |
|---|
| Product | putative GAF sensor protein |
|---|
| Protein accession | YP_001068697 |
|---|
| Protein GI | 126433006 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2203] FOG: GAF domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.667086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.648976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCG AGACCCCGGT GTCGCCGTTC GCCCTGCCGC CGGAGGTGGA AGACGAACGC
GTCCGCTCGC TGGCCCAGCT GCATGTGCTC GACACCCCAC CGGAGGACCG GTTCGCCCGG
ATCACCCGCA TGGCACGGGC CGTCTTCGGC ATCCCGATGG CGGCCGTCGC CCTCGTCGAC
CGGGACCGGC AGTGGTTCAA ACAGGTCGAC GGCCTCGACA TCGGCACCAA CCTGCCGCGG
AACCAGACGA TCTGCCAGGC GACCATCGCC CGCAGCTACG AGCAACCCGA CAACCCGGCG
CTGATCATCG AAGATGCCGC TGCCCGACCG GAATTCGCGA TGGTCCCGGG AATCGGTGAG
CCGGGCGGCA TCCGCTTCTA CGCCGGCTAT CCGCTCTACG GTCCCGGCGG CCATCCGGTC
GGCACCTTCT GCATCTACGA CACCGAACCC CGCTCGTTGA CCGAAGCCGA ACTGACGACG
TTCACCGAAC TCGCGTCCTG GGCGCAGCGC GAACTGGAAC ACTCCGACGA CCTCGAGCGC
GCCGCCGACG TGCAGCGGCA TCTGCTGCCA CGCCCACTCG GCGACCTCCC CGGGTATTCG
GTGTGCGCGA TGTGCCTGCC CGCCTACGCC GTCGGCGGCG ACTTCTACGA CCACTACCGC
GTCGAAGGCG GTGCGGTGTT CACGGTGGCC GACGTGATGG GCAAGGGTTT GGGCGCCGCG
ATTCTGGCGG CCAGCGTGCG CTCCGCGCTG CGGGGCGCAT CGAGCGCGTT CGCCCGGGTC
GAACGCCCAC TCGCCCCAGA GGACGTGGTC GACGCCGTCG CCCTCCAGTT GTCCGAGGAT
CTCAGTAGCA CCGACACCTT CGTCACGCTC TTCCACTGCC AACTCGACAG CGCGACCGGA
ACCGTGCGCT TCGTCGACGC CGGACACGGC ATCGCCCTGG TGGTGCGCGC CGACGGCCGG
GTCGAGGGAC TCGACAGCGC CGGTCTACCC CTCGGTGTGA TGCCGGGCGA CACCTGGGAT
TGTGGTGAGG TGACACTCGG GGAGGGGGAT ACGTTGATCA TCGCCTCCGA CGGTGTGCTC
GACCTCATCG GCGACGGCAG CGATGCGCGC CCGGCGCTAC GCTTCGTCGC CACCCACCCC
GAACCGGCCG ACCTGTGCGC CCGCGCCCGG GCACTGGTCG CGGAGAAGTC ACCGCTGGAC
GACGTCACGC TCGTGGCGGT GCGCCGAGAG CCGACCGCGT GA
|
|---|
| Protein sequence | MTAETPVSPF ALPPEVEDER VRSLAQLHVL DTPPEDRFAR ITRMARAVFG IPMAAVALVD
RDRQWFKQVD GLDIGTNLPR NQTICQATIA RSYEQPDNPA LIIEDAAARP EFAMVPGIGE
PGGIRFYAGY PLYGPGGHPV GTFCIYDTEP RSLTEAELTT FTELASWAQR ELEHSDDLER
AADVQRHLLP RPLGDLPGYS VCAMCLPAYA VGGDFYDHYR VEGGAVFTVA DVMGKGLGAA
ILAASVRSAL RGASSAFARV ERPLAPEDVV DAVALQLSED LSSTDTFVTL FHCQLDSATG
TVRFVDAGHG IALVVRADGR VEGLDSAGLP LGVMPGDTWD CGEVTLGEGD TLIIASDGVL
DLIGDGSDAR PALRFVATHP EPADLCARAR ALVAEKSPLD DVTLVAVRRE PTA
|
|---|
| |