| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0335 |
|---|
| Symbol | |
|---|
| ID | 4876081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 366926 |
|---|
| End bp | 369196 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640137649 |
|---|
| Product | trehalose synthase |
|---|
| Protein accession | YP_001068639 |
|---|
| Protein GI | 126432948 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | [TIGR02455] trehalose synthase, Pseudomonas stutzeri type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.749024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGG CGCCAGAGAC GGACTACGAC GACCAGGCCG GGTCGGGCAC CGACGATCAG
ACGAACGAGC CCAGCGAGAT CACCTACGAC GAGTACCTGC ATCCGGCGCG TCCGCGGGCG
CTGCGGTTCC GTCCCCGCGT CAAATCGCCG TTCACCCGCC GCTCGGTGGC CCAGGACGGT
CCGGCGCGCG CGGACAACCC GGCGTACGTG TCGTGGCTGC TGTCGCAGTC GATGCTCGCC
GACGCCAACG AGATCAGCCA GCAGTTCTCC GGTCAGGGCT CGATGTGGCA GAACCCGTAC
GCGACACCGA GCCCGCGCGG CGCGGTGGAG ACGGCGTCGG TGTGGTTCAC CGCCTACCCG
TTGTCGTTGA TCACCCGGCC CAACGAGTCG TTCCTCAAGG CGCTGGCCGA CGACGAGATG
TGGAAGGCGT TCGCCGACAT CGGTATCGAG GCCATCCACA CCGGACCGGT CAAGCGCGCG
GGCGGGATCT CGGGGTGGCA GACCACCCCG AGCGTCGACG GCCACTTCGA CCGCATCAGC
ACCGAGATCG ACCCGGCCTT CGGCACCGAG GAGGAGTTCC GCAAGATGTG CGGGACGGCC
AACTGGTACG GCGGCACGAT CATCGACGAC ATCGTGCCCG GCCACACCGG TAAGGGCGCC
GACTTCCGCC TCGCGGAGAT GAAGTACGCC GACTATCCCG GGATCTACCA CATGGTGGAG
GTGGATCCCC GCGACTGGGA ACACCTGCCC GCCGTGCCGC CCGGTGTCGA CTCGGTCAAC
ATCGACCAGG CCACCGAGGA GTGGCTGGAC AAGGCCGGTT ACATCATCGG CCGCCTGCAA
CGGGTGATCT TCTACGCCGA GGGCATCAAG GAGACCAACT GGAGCGTCAC CCGGCCGGTG
CTCGGCGTCG ACGGCGTGGA GCGCCGCTGG GTGTACCTGC ACTACTTCAA GGACGGTCAG
CCGTCGATCA ACTGGCTCGA CCCGTCGTTC GCCGGGATGC GCCTCGTGAT CGGGGACGCG
CTGCATTCGC TCGCCGACCT GGGCACCGGC GGACTTCGCT TGGACGCCAA CGGTTTTCTC
GGCGCGGAGA AGACCGCCGC CGAGGACAGC ACCGCCTGGT CGGAGGGTCA TCCGCTGTCC
GAGGCGGCCA ACCATCTGAT CGCCAGCATG GTGCGCAAGG TGGGCGGGTT CACCTTCCAG
GAGCTCAACC TCACCATCGA CGACATCCGC CAGATCGGCG AAGCGGGCGC GGACCTGTCC
TACGACTTCA TCAACCGGCC CGCCTACCAG CACGCCCTGG CCACCGCGGA CACCGAGTTC
CTGCGGCTGA CGCTGCGCAC CACGCTGGAA CTCGGCGTCG ACCCGGCGTC GTTGATCCAC
GCCCTGCAGA ACCACGACGA GTTGACCTAC GAACTCGTGC ACTGGTCGAA CGGACACCGC
GACGACATCT ACACCTACAA GGGTGAGGAG ATCACCGGCG AGGCGCTCGG CGAGACGATC
CGCCGGGACC TCAGCGTACG GCTCACCGGC GAGAACGCCC CGTACAACCT GGTTTTCACC
ACCAACGGGA TCGCCTGCAC CACCGCGACG GTCATCGCGG CCACCCTCGG CATCACCGAT
CTGAACGAGA TCGACGACGA TCCGGTGCGC ATCGACCGCA TCCGGCGAGC CCATCTGCTG
CTGGCGATGT TCAACGCGCT GCAGCCGGGG GTGTTCGCGC TGTCGGGGTG GGACCTGTGC
GGCATGCTCA CGTTGCCGGC CGGGCAGGTC GGCGAACTCC TGCGCGGCGG CGACACCCGG
TGGATCCACC GGGCCGCCCA CGATCTGATG GGCGTGAATC CCGCTGCGAC ACAGTCGTTG
GCGGGGATGC CGCGGGGGCG GAGCCTCTAC GGGTCGATCC CCGATCAGCT CGACGACGAG
ACCAGCTTCC TACGCCAGTT GCAGGCGATC CTGCGGGTGC GTTCGCACTA CGGCATCGCG
ACGAGCCGCC AGGTCGACAT CCCCGAGGTC TCCCACCGCG GCATGCTCGT GCTGGTGCAC
CAACTGGCGG ACGAGGGCCG CTATCAGTTG ACCGTGCTGA ACTTCGCCAA CGAGGAGGTC
GCCGGAACGG TGCGCTCCGA GGCGCTGCCG CCCGGCGCCG AGGTGTCGGA CATGTTCACC
GGCCACGCCT TCGCCACGGT CGACGACCTG CACAGCTTCA CCGTCGAGAT GCCCGCGCAT
CACGGGATGT CCCTGCTGGT CGAGGTCACC GCCGACGACT CCGAGACGTG A
|
|---|
| Protein sequence | MSEAPETDYD DQAGSGTDDQ TNEPSEITYD EYLHPARPRA LRFRPRVKSP FTRRSVAQDG
PARADNPAYV SWLLSQSMLA DANEISQQFS GQGSMWQNPY ATPSPRGAVE TASVWFTAYP
LSLITRPNES FLKALADDEM WKAFADIGIE AIHTGPVKRA GGISGWQTTP SVDGHFDRIS
TEIDPAFGTE EEFRKMCGTA NWYGGTIIDD IVPGHTGKGA DFRLAEMKYA DYPGIYHMVE
VDPRDWEHLP AVPPGVDSVN IDQATEEWLD KAGYIIGRLQ RVIFYAEGIK ETNWSVTRPV
LGVDGVERRW VYLHYFKDGQ PSINWLDPSF AGMRLVIGDA LHSLADLGTG GLRLDANGFL
GAEKTAAEDS TAWSEGHPLS EAANHLIASM VRKVGGFTFQ ELNLTIDDIR QIGEAGADLS
YDFINRPAYQ HALATADTEF LRLTLRTTLE LGVDPASLIH ALQNHDELTY ELVHWSNGHR
DDIYTYKGEE ITGEALGETI RRDLSVRLTG ENAPYNLVFT TNGIACTTAT VIAATLGITD
LNEIDDDPVR IDRIRRAHLL LAMFNALQPG VFALSGWDLC GMLTLPAGQV GELLRGGDTR
WIHRAAHDLM GVNPAATQSL AGMPRGRSLY GSIPDQLDDE TSFLRQLQAI LRVRSHYGIA
TSRQVDIPEV SHRGMLVLVH QLADEGRYQL TVLNFANEEV AGTVRSEALP PGAEVSDMFT
GHAFATVDDL HSFTVEMPAH HGMSLLVEVT ADDSET
|
|---|
| |