| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0254 |
|---|
| Symbol | |
|---|
| ID | 4876000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 289002 |
|---|
| End bp | 290396 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640137568 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001068558 |
|---|
| Protein GI | 126432867 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.78177 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACC GCATCACCGA CTGGGATCCC GAGGACACGA TCGCCTGGGA AGCCGGTAAC
AAGTACATCG CCCGCCGCAA CCTGATCTGG TCGGTGGCCG CCGAGCACAT CGGCTTCTCC
GTGTGGTCCA TCTGGTCGGT CATGGTGTTG TTCATGCCCG AGGCCGTCTA CGGATTCTCC
GCGGGCGACA AGTTCCTGCT CGGTGCCACC GCCACCCTCG TCGGGGCCTG CCTGCGAATC
CCCTACACGC TGGCCACCGC GAGGTTCGGC GGGCGCAACT GGACGGTGTT CTCGGCATTC
GTGCTGCTGA TCCCGACCCT CGGCACCATG GTGTTGCTCG CCAATCCCGG TCTGCCGCTG
TGGCCGTACC TGCTGTGTGC GGCGCTGGCC GGCTTCGGTG GCGGCAACTT CGCCTCCTCG
ATGACCAACA TCAATGCCTT CTACCCGCAG CGACTCAAGG GGTGGGCACT GGGCCTCAAC
GCCGGCGGCG GCAACATCGG GGTGCCGATG ATCCAGCTGG TCGGGCTGCT CGTCATCGCC
ACCGCGGGTA ACCGGCAGCC GTACTGGGTG TGCGCGGTCT ACCTGGTGGC ACTGGCCGTC
GCCGGTATCG GCGCGGCGCT GTACATGGAC AACCTCGAAC AGCACAAGAT CGACTTCACC
GCGATGAAAG ACATTCTGCG GGAACGGGAT ACGTGGGTGA TCTCGCTGCT CTACATCGGC
ACGTTCGGCT CGTTCATCGG GTTCGCGTTC GCATTCGGTC AGGTGCTGCA GATCAACTTC
GCCGCCCGCG GGCAGAGTCC CGCCGAGGCG TCGCTGCACG CCGCGCAGAT CGCGTTCGTC
GGCCCGCTGC TCGGCTCGTT GTCACGGGTG TACGGCGGCA GACTGGCCGA CCGCATCGGC
GGTGGCCGTG TCACCCTCGC CGTGTTCGCC GGCATGATCC TCGCGGCCGG AGTGCTGGTC
ACCGTCAGCA CCCTCGACGA CGGCAGCCCG GGTGCGGCGA CCGCCGCCAC GATGATCGGC
TACGTCGTCG GCTTCATCGC CCTGTTCCTG CTGTCCGGCA TCGGCAACGG GTCGGTGTAC
AAGATGATCC CGTCGATCTT CGAGGCGCGC AGCCGCTCGC TGGACGCCGG CGAGGAGCAG
CGGGTGGCCT GGTCGCGCGC GATGTCCGGG GCGCTGATCG GGTTCGCCGG CGCCATCGGT
GCGCTCGGCG GGGTGGGCAT CAACCTCGCG CTGCGGCAGT CCTACCTCTC GAGCGGGTCG
GCCACCACCG CGTTCTGGAT CTTCGCAGTG TTCTACGTGG TGGCCTCCGC GGTCACCTGG
GTCATGTACG TGCGTCGCCC GAGCGGCGAC GCATCGGTCG ACCGCGCGTC GCGGCCGGAC
CTGGCGCGTA CGTGA
|
|---|
| Protein sequence | MSHRITDWDP EDTIAWEAGN KYIARRNLIW SVAAEHIGFS VWSIWSVMVL FMPEAVYGFS
AGDKFLLGAT ATLVGACLRI PYTLATARFG GRNWTVFSAF VLLIPTLGTM VLLANPGLPL
WPYLLCAALA GFGGGNFASS MTNINAFYPQ RLKGWALGLN AGGGNIGVPM IQLVGLLVIA
TAGNRQPYWV CAVYLVALAV AGIGAALYMD NLEQHKIDFT AMKDILRERD TWVISLLYIG
TFGSFIGFAF AFGQVLQINF AARGQSPAEA SLHAAQIAFV GPLLGSLSRV YGGRLADRIG
GGRVTLAVFA GMILAAGVLV TVSTLDDGSP GAATAATMIG YVVGFIALFL LSGIGNGSVY
KMIPSIFEAR SRSLDAGEEQ RVAWSRAMSG ALIGFAGAIG ALGGVGINLA LRQSYLSSGS
ATTAFWIFAV FYVVASAVTW VMYVRRPSGD ASVDRASRPD LART
|
|---|
| |