Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_0111 |
Symbol | |
ID | 4875857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 119625 |
End bp | 121271 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640137425 |
Product | virulence factor Mce family protein |
Protein accession | YP_001068415 |
Protein GI | 126432724 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACGA TCTTCAACGT GCGGAACATG AAGATGCCGA CGTTGTCACG CGCTTCGGTG ATCATCGGCA CGCTTGTCGT GGTGCTGGCG CTGGTGGCCG CGTTCGCGGG CTGGCAGCTG TACAAGAGGC TGTCCACGAA CACCGTCGTG GCGTACTTCT CCGACACCCT GGCGCTGTAC CCCGGCGACA AGGTGCAGAT CATGGGTGTG CGGGTCGGCA CGATCGACAA GATCGAACCG GCGGGCGACA AGATGAAGGT GACCTTCAGC TACGAGTCGA AGTACAAGGT GCCCGCGAAC GCCACCGCGT CGATCCTCAA CCCGAGCCTG GTGGCCTCGC GCACCATTCA GCTGGCCCCG CCGTACACCG GCGGCCCGGT CATGGAGGAT GACGCGGTCA TCCCGATCGA CCGCACCCAG GTGCCCGTCG AGTACGACGA GCTGCGTGAC TCGCTCGACC GCATCCTCAC CGACCTCGGC CCCACGCCGG ACCAGCCCAA GGGTCCGTTC GGTGACGTGA TCGAGTCCTT CGCCGACGGT CTGTCCGGCA AGGGAAAGCA GATCAACACG ACGTTGAACA GCCTCTCGGA GGCGCTGACC ACCCTCAACG AGGGCCGCGG TGACTTCTTC AGCGTGGTCA AGAGCCTCGC GTTGTTCGTC AACGCGCTCT ACCGCAGCGA TCAGCAGTTC GTCGCCCTCA ATGACGACCT GGCGCAGTTC ACCAACTCGT TCACCAACAC CGACCGCGAG CTGGCGACCG CGCTGCAGGA CCTCAACGAG CTGCTCACCA CCACGCGCGG GTTCCTCGAC GAGAACAGTG AGGTCCTGAC CAAGGACATC AACAACCTCG CCGACGTGAC CAACGCGATC CTGCAGCCCG AACCGCTCGA CGGTCTGGAA ACGGGTCTGC ACGTGTTACC GAACCTGGGC GGCAACATCC TCAACATCAG CTCACCGGTC AACGGCGGCA TCGTCGGTGT GCCGGTCATC AACGGCATGG CCAACCCGAT GCAGTTCATC TGCAGTTCGA TCCAGGCGGG CAGCCGGCTG GGCTACCAGG AGTCGGCGGA ACTGTGCGCG CAGTACCTGG CGCCGATCCT CGATGCGCTG AAGTTCAACT TCCCGCCGTT CGGGTTGAAC CAGATCAGCA CGGCCATGAC GTTGCCGAAG ATGATCGCCT ACTCCGAGGA CCGGCTGCGC CCGCCGCCGG GATACAAGGA CACCACGGTG CCCGGCATCT TCTCCCGCGA CACGTTGTTC TCCCACGGCA ACCACGAGCC CGGCTGGGTC GTCGCCCCGG GGATGCAGGG CGTCGACGTG CAGCCGTTCA CCGCGAACAT GCTGACGCCG CAGTCGCTGG CCGCGCTGCT CGGCGGACCC GACGCGCCGA TCCCGGGTGC ACCGCCCGCG TTCGGCACCA CGCGCGACGG CAACCTGCCC GGCCCGCCGA ACGCCTTCGA CGAACGCAAT CCGTTGCCGC CGCCGTGGTA CCCGCAACCC GGCCCGCCGC CCGCACCCGC CCCGGGTGTC ATCCCGGGCG ACCCCGGGGG CTCCCCGCTG TCGGGTCCGG CGCCAGGACC CGCGCCCGCC GCGCAGGCAC CCGCACCGGC AGGCCCGCCG TTGCCCGCTG AAGCAGGAGC GCCGTGA
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Protein sequence | MSTIFNVRNM KMPTLSRASV IIGTLVVVLA LVAAFAGWQL YKRLSTNTVV AYFSDTLALY PGDKVQIMGV RVGTIDKIEP AGDKMKVTFS YESKYKVPAN ATASILNPSL VASRTIQLAP PYTGGPVMED DAVIPIDRTQ VPVEYDELRD SLDRILTDLG PTPDQPKGPF GDVIESFADG LSGKGKQINT TLNSLSEALT TLNEGRGDFF SVVKSLALFV NALYRSDQQF VALNDDLAQF TNSFTNTDRE LATALQDLNE LLTTTRGFLD ENSEVLTKDI NNLADVTNAI LQPEPLDGLE TGLHVLPNLG GNILNISSPV NGGIVGVPVI NGMANPMQFI CSSIQAGSRL GYQESAELCA QYLAPILDAL KFNFPPFGLN QISTAMTLPK MIAYSEDRLR PPPGYKDTTV PGIFSRDTLF SHGNHEPGWV VAPGMQGVDV QPFTANMLTP QSLAALLGGP DAPIPGAPPA FGTTRDGNLP GPPNAFDERN PLPPPWYPQP GPPPAPAPGV IPGDPGGSPL SGPAPGPAPA AQAPAPAGPP LPAEAGAP
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