| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0098 |
|---|
| Symbol | |
|---|
| ID | 4875844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 106098 |
|---|
| End bp | 106757 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640137412 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001068402 |
|---|
| Protein GI | 126432711 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.31231 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.349087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCG AAGCCTCGCC GAACGGCTCG ACGCGGCGCG ATGAGCTGCT GAGGGTCGCC
ACCAAGCTGT TCGCCGCCCG CGGCTACCAC GGCACCCGGA TGGATGACGT CGCCGACGCC
GTCGGCCTGA ACAAGGCCAC GGTGTACCAC TACTACGCGA GCAAGTCGCT CATCCTCTAC
GACATCTACA AAGGCGCCGC CGACTTCACC GTCGACGCAC TGCACGACGA TCCGACGGCG
TCGGCCCGCG AGACGATCTA CCACTTCACC CGCCGGTTGC TCGTCGGCAT CGCCAACGAC
ATCGAGCGCG CCGCCGTGTA CTTCCAGGAG GGCCCCTACA TCGGCGAGTG GTTCACCGAG
GAGCAGGTCG AGTACATCCG CGAGAAGGAG ACCCAGGTCT ACGAGCACGT GCGTGACGTG
ATCGACCGGG GCATCGCCAG CGGCGAGTTC TACGACTGCG ATTCGCACGT GCTGGCGCTC
GGCTACATCG GGATGACGCT GGGCGCCTAC CGCTGGCTGC GGCCCCAGGG CCGGCGCACC
GCACAGGAGA TCGCCGAGGA GTTCAGCACC GCACTGCTGC GCGGGCTGAT CCGCGACGAG
GCGGTGCGCA CCGAGTCACC GCTGGGCGTG GACGTCCGGA CGGGAGTAGG CAGTGACTGA
|
|---|
| Protein sequence | MSAEASPNGS TRRDELLRVA TKLFAARGYH GTRMDDVADA VGLNKATVYH YYASKSLILY
DIYKGAADFT VDALHDDPTA SARETIYHFT RRLLVGIAND IERAAVYFQE GPYIGEWFTE
EQVEYIREKE TQVYEHVRDV IDRGIASGEF YDCDSHVLAL GYIGMTLGAY RWLRPQGRRT
AQEIAEEFST ALLRGLIRDE AVRTESPLGV DVRTGVGSD
|
|---|
| |