| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_0029 |
|---|
| Symbol | |
|---|
| ID | 4875775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 33176 |
|---|
| End bp | 34183 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640137343 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001068333 |
|---|
| Protein GI | 126432642 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.384866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGAAGA AGCTCGTCAT CGGGGCCAGC GGGTTCCTGG GCTCCCACGT CACGCGCCGA
CTGGTCGAGC GCGGCGACGA CGTACGCGTG CTCATCCGCC ACACCAGCTC GACCCGCGGC
ATCGACGGAC TGCCCGTCGA ACGCCACTAC GGCGACATCT TCGACGACGA CGCCGTGCGC
GCCGCGGTGG CGGGCTGCGA CGTCGTCTGC TACTGCGTGG TCGACGCCCG CGCATGGCTG
CGGGACCCGG CACCGCTGTG GCGCACCAAC GTCGAAGGGC TGCAACGGGT ACTCGACGTC
GTCGCCGACG CCGACCTGTA CCGCTTCGTG TTCACCAGTT CCATCGCCAC GATCGGTATC
GCCGACTCCG GCCCGGCGAC CGAGGAGCTG TCCCACAACT GGCTCGACCG GGCGGGCGAG
TACGTCCGGA CCCGCGTCGC CGCCGAAAAC CTGGTGCTGC GATACCACCG CGAACGGGCC
CTACCCGCGG TGGCGATGTG CGTGTCCAAC ACCTATGGCC CCGACGACTG GCTGCCGACA
CCGCACGGCG GACTCGTCGC CGCCGCGGTG CGCGGGAAGC TGCCGTTCTA CATCGACGGC
GCCCAGGCCG AGGTGGTCGG TGTGCGCGAC GCGGCCGATG CCCTCATCCT GGCCGGCGAA
CGCGGACGAC CGGGGGAGCG CTACATCGTC TCCGAACGGT TCATGACCGC CCGTGAGATC
TACCAGACCG CTTGCGCCGC AGTCGGAGTG ACACCGCCAC AGCGCGGTGT GCCGATCCGG
GCGCTGGCCG CCGCCGCGGT GCCCAGCGCG TGGCTGGCCC GCCTGCGCCG CCGCGACACC
CGGCTCACGC CGCTGACCAT CCGGCTCATG CACATCATGT CGCCGATGGA CCATTCCAAG
GCCGAACGCG AACTCGGATG GCGTCCGGCA CCCACGACGG ATGCCCTCGC CGAGGCCGCG
GAGTTCTTCG TCGGCAACCG CCGCCGACCC GCCGAGGACC GCCGCTGA
|
|---|
| Protein sequence | MGKKLVIGAS GFLGSHVTRR LVERGDDVRV LIRHTSSTRG IDGLPVERHY GDIFDDDAVR
AAVAGCDVVC YCVVDARAWL RDPAPLWRTN VEGLQRVLDV VADADLYRFV FTSSIATIGI
ADSGPATEEL SHNWLDRAGE YVRTRVAAEN LVLRYHRERA LPAVAMCVSN TYGPDDWLPT
PHGGLVAAAV RGKLPFYIDG AQAEVVGVRD AADALILAGE RGRPGERYIV SERFMTAREI
YQTACAAVGV TPPQRGVPIR ALAAAAVPSA WLARLRRRDT RLTPLTIRLM HIMSPMDHSK
AERELGWRPA PTTDALAEAA EFFVGNRRRP AEDRR
|
|---|
| |