Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_0002 |
Symbol | |
ID | 4875748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 2303 |
End bp | 3499 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640137313 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001068306 |
Protein GI | 126432615 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.042032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTGG TGCCGACGAC GGCGGGTCAC ACCGACCTGA AGTTCCGCCT GGTGCGAGAG GACTTCGCCG ACGCAGTGGC CTGGGTGGCC CGCAATCTGC CGACCCGTCC GACCGTCCCC GTGCTGGCCG GCGTGCTGCT CACCGGCGAC GACGACGGGC TGACGATCTC CGGATTCGAC TACGAGGTTT CGGCCGAGGT GCGTGTCGCG GCCGAAATCG CTTCTCCGGG AAGCGTTCTG GTGTCGGGAC GGCTGTTGTC CGATATCACC AAGGCGCTGC CCGCCAAACC CGTCGACGTC AGCGTCGAGG GCACCCGCGT CTCGCTGACC TGCGGGAGCG CCCGCTTCTC GCTGCCGACC ATGGCCGTCG AGGACTACCC CGCGCTGCCG ACGCTGCCCG ACGAGACCGG GGTGATCGGC GCCGACCTGT TCGCCGAAGC CATCGGCCAG GTCGCGGTGG CCGCCGGCCG CGACGACACG CTGCCGATGC TCACCGGCAT CCGCGTTGAG ATCACCGGTG AGAGTGTGGT TTTGGCGGCA ACCGACCGGT TCCGCCTGGC GGTGCGCGAG TTGACCTGGT CGACGAGCTC GCCCGACGTC GAGGCCGCGG TGCTGGTACC GGCCAAGACC CTCGCCGAGG CGGCCAAGGC CGGCACCGAC GGGACCGATG TGCACCTGGC GCTGGGCGCC GGATCCGCGG TCGGCAAAGA GGGCCTGCTG GGGATTCGCA GCGAGGGCAA GCGCAGCACC ACCCGCCTGC TCGACGCGGA ATTCCCGAAG TTCCGCCAAC TGCTGCCCAG TGAGCACACC GCGGTCGCGA CGATCGGCGT CGCCGAACTC ACCGAGGCGA TCAAGCGTGT CGCGCTGGTG GCCGACCGCG GCGCCCAGGT GCGGATGGAA TTCGCCGACG ACGTGTTGCG GTTGTCCGCC GGCGCCGACG ACGTCGGCCG CGCCGAGGAG GACCTGGCCG TCGCGTTCTC CGGTGAGCCG CTCACCATCG CCTTCAACCC GACGTATCTC ACCGACGGCC TCGGCTCGCT GCATTCCGAG CGGGTGACGT TCGGCTTCAC GACGCCCAGC CGGCCCGCGG TCCTCCGCCC GGCGGGCGAC GAGGACACCG GCGGTGGCGC CGGCCCGTTC CCGGCCCTGC AGACCGATTA CGTTTACCTG TTGATGCCGG TACGGCTTCC CGGCTGA
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Protein sequence | MDVVPTTAGH TDLKFRLVRE DFADAVAWVA RNLPTRPTVP VLAGVLLTGD DDGLTISGFD YEVSAEVRVA AEIASPGSVL VSGRLLSDIT KALPAKPVDV SVEGTRVSLT CGSARFSLPT MAVEDYPALP TLPDETGVIG ADLFAEAIGQ VAVAAGRDDT LPMLTGIRVE ITGESVVLAA TDRFRLAVRE LTWSTSSPDV EAAVLVPAKT LAEAAKAGTD GTDVHLALGA GSAVGKEGLL GIRSEGKRST TRLLDAEFPK FRQLLPSEHT AVATIGVAEL TEAIKRVALV ADRGAQVRME FADDVLRLSA GADDVGRAEE DLAVAFSGEP LTIAFNPTYL TDGLGSLHSE RVTFGFTTPS RPAVLRPAGD EDTGGGAGPF PALQTDYVYL LMPVRLPG
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