Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_4081 |
Symbol | |
ID | 4902309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3984390 |
End bp | 3984902 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640137307 |
Product | SET domain-containing protein |
Protein accession | YP_001068300 |
Protein GI | 126454312 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.321393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTCAC GCAGGATCGT GGTACGCCGC TCGGGCGTTC ACGGCAAGGG CGTATTCGCC GCGGTACCGA TCAAGGCGGG AGAGCGCGTA GTCGAATACA AGGGCGAGCG AATCTCGTGG AAAGAGGCGC TGCGCCGCCA TCCGCACGAC CCGGACGATC CGAATCACAC GTTTTACTTC GCGCTGGAAG AGGGCGGGGT GATCGACGGC AAGATCAACG GCAACAGCGC GCGCTGGATC AACCATTCGT GCGCGCCGAA CTGCGAAGCC GAGGAAGTGG GCGGGCGCGT GTACATCCAT GCGCTGCGTG ACATCGACGA GCAGGAAGAA CTGTTCTACG ACTACGGTCT CGTGATCGAC GCGCGCCTGA CGAAAAAGCT CAAGCGCGAA TACGCGTGCC ATTGCGGCGC GGCGACGTGC CGCGGCACGC TGCTTGCAAC GTCGGAAGAA GACGAAGGCA AGAAAAAGAA GAAGGCGAAG AAAGGCGGCA AGGACAAGAA AAAGAAGAAG TGA
|
Protein sequence | MSSRRIVVRR SGVHGKGVFA AVPIKAGERV VEYKGERISW KEALRRHPHD PDDPNHTFYF ALEEGGVIDG KINGNSARWI NHSCAPNCEA EEVGGRVYIH ALRDIDEQEE LFYDYGLVID ARLTKKLKRE YACHCGAATC RGTLLATSEE DEGKKKKKAK KGGKDKKKKK
|
| |