| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_4058 |
|---|
| Symbol | |
|---|
| ID | 4900454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3962284 |
|---|
| End bp | 3964068 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640137284 |
|---|
| Product | hydrophobic amino acid ABC transporter permease/ATP-binding protein |
|---|
| Protein accession | YP_001068277 |
|---|
| Protein GI | 126453842 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGA TCTTGCGCAA CAAAGCGTTC TGGCTGTTTC TCGTCGCGCT GTTCGCGCTA
CCGGCATTGC CCGGCGCGGC GCGCGTACCC GAGTACTGGA TCACGCTGCT GAACTACATC
GGGCTGTATG CGATCGTCGC GGTCGGGCTC GTGTTGCTGA CCGGAATCGG CGGGATGACG
AGTTTCGGGC AGGCGGCGTT CGTCGGCGTC GGCGCGTATG CAACCGCCTT TCTGACGACC
GCGTACGGCG TGTCGCCGTG GCTCGGACTG ATCGCGGGCG TCGTGCTGAC GGCGCTCGTC
GCGCTCATGC TGGGCGTCGT CACGATGCGC CTCTCCGGGC ACTTCCTGCC GCTCGGAACG
ATCGCGTGGG GGCTCGCGCT GTTCTTTCTG TTCGGGAATC TCGACTGGCT CGGCAAATAC
GACGGAATCA ACGGCATTCC CGCACTCGCC TTGTTTGGCC ACGCGTTCGA TACGGGGCGC
AGTCTCTATT ACCTGATCTG GATTGTCGTG CTCGCGGCGA TCGTCTCTGT TCAGAATCTG
CTTAATAGCC GGCCCGGCCG TGCGATTCGT GCGCTGCGCG GCGGCGGCAT GATGGCCGAG
GCGATGGGCG TGAACACCGG CTGGTTGCGG GTGGTGATCT TCGTCTATGC CGCAGTGCTC
GCGTCAATCT CGGGTTTTCT GTATGCGCAT CTGCAGCGTG CGGTGAATCC GACGCCGTTC
GGGCTCAGTC ACGGGATCGA GTTCCTGTTC ATGGCCGTGG TAGGCGGCGT CGCGCACGTA
TGGGGCGCGG TGCTCGGCGC GGCGATCGTC ACCGTGCTGC AGGATTACCT GCAAACGCTG
CTGCCGAAGC TGCTCGGCGC GGAAGGCAAT TTCGAGATCA TTGTGTTCGG CGTGCTGATG
GTGCTGCTGT TGCAGTACGC GCGGCAGGGC GTGTGGCCAT TCGTTGCGAA GCTCATGCCG
CGCGAGCCGG CGGCCCGGGC GCCGGGTCAG GCAGCGCCGT TGCCGCGGCG CGCCCGACCG
CAGGCCGGCG AGGCGCTGCT CGTCGTCGAT AACGTGCGCA AGCAGTTCGG CGGGCTCGTT
GCCGTGAACG ACGTCAGCTT CGACGTGCTG GCCGGGCAAA TCGTCGGCCT GATCGGCCCG
AATGGCGCGG GCAAGTCGAC GACGTTCAAC CTCGTGACCG GCGTGCTGCG GCCAACGAGC
GGCGCAATCA CATTCCGCGG CGAACGGATT GACAAACTTG TTTCACGTGA AATCGTGAAG
CGGGGTATCG GCCGGACATT CCAGCACGTG AAGCTGCTGC CTGGAATGAC GGTGCTGGAA
AACGTCGCGA TCGGCGCGCA TTTGCGCGGC TCGGCCGGTA TCTGGCGCAG CGTCGTCCGG
CTGAATGCGC ACGAGGAGGC GCGGCTGATG TCGGAGGCGG CGCGGCAGCT TCGGCGTGTC
GGGCTGGATG GGCATATGTA TGACGAGGCC GGCAGCCTTG CGCTCGGCCA GCAGCGGATT
CTGGAGATCG CCCGTGCGCT GTGTAGCGAC CCGACACTAT TGCTGCTCGA TGAGCCGGCG
GCTGGCCTGC GTTATCAGGA AAAGCAGCAG TTGGCCGAAC TATTGCGCAA GCTGAAGGCG
GAGGGGATGA GTGTGCTGCT TGTCGAGCAT GACATGGACT TTGTGATGAA TCTCACCGAT
CGACTGGTCG TGATGGAGTT CGGTACGCGG ATCGCCGAAG GCTTGCCACA GGATGTGCAG
AAGGATCCGG CAGTGCTGGA AGCCTATCTC GGTGGGGTGG AGTGA
|
|---|
| Protein sequence | MKAILRNKAF WLFLVALFAL PALPGAARVP EYWITLLNYI GLYAIVAVGL VLLTGIGGMT
SFGQAAFVGV GAYATAFLTT AYGVSPWLGL IAGVVLTALV ALMLGVVTMR LSGHFLPLGT
IAWGLALFFL FGNLDWLGKY DGINGIPALA LFGHAFDTGR SLYYLIWIVV LAAIVSVQNL
LNSRPGRAIR ALRGGGMMAE AMGVNTGWLR VVIFVYAAVL ASISGFLYAH LQRAVNPTPF
GLSHGIEFLF MAVVGGVAHV WGAVLGAAIV TVLQDYLQTL LPKLLGAEGN FEIIVFGVLM
VLLLQYARQG VWPFVAKLMP REPAARAPGQ AAPLPRRARP QAGEALLVVD NVRKQFGGLV
AVNDVSFDVL AGQIVGLIGP NGAGKSTTFN LVTGVLRPTS GAITFRGERI DKLVSREIVK
RGIGRTFQHV KLLPGMTVLE NVAIGAHLRG SAGIWRSVVR LNAHEEARLM SEAARQLRRV
GLDGHMYDEA GSLALGQQRI LEIARALCSD PTLLLLDEPA AGLRYQEKQQ LAELLRKLKA
EGMSVLLVEH DMDFVMNLTD RLVVMEFGTR IAEGLPQDVQ KDPAVLEAYL GGVE
|
|---|
| |