Gene BURPS1106A_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_4042 
SymbolatpD 
ID4901079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp3948549 
End bp3949943 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content63% 
IMG OID640137268 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_001068261 
Protein GI126455115 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTG CTGCTTTGGT AGAAGGCAAG ATCGTACAGT GCATCGGCGC CGTTATCGAC 
GTGGAATTCC CGCGCGAGAG CATGCCGAAG ATCTACGACG CGCTCATTCT GGAAGGCTCG
GAACTGACGC TCGAAGTCCA GCAGCAGCTG GGCGACGGCG TGGTCCGTAC CATCTGTCTG
GGTGCCTCCG ACGGCCTGCG CCGCGGCGTC GTGGTGAAGA ATACGGGCAA TCCGATTTCG
GTGCCGGTCG GCAAGCCGAC CCTCGGCCGC ATCATGGACG TGCTCGGCCG CCCGATCGAC
GAGGCGGGAC CGATCGAGAG CGAAAACAAG CGCTCGATCC ACCAGAAGGC GCCGGCGTTC
GACGAGCTGT CGCCGTCGAC CGAACTGCTC GAAACGGGTA TCAAGGTCAT CGATCTGATC
TGCCCGTTCG CAAAGGGCGG CAAGGTCGGC CTGTTCGGCG GCGCGGGCGT GGGCAAGACC
GTCAACATGA TGGAGCTCAT CAACAACATC GCGAAGGAGC ACGGCGGTTA CTCCGTGTTC
GCGGGCGTGG GCGAGCGTAC CCGTGAAGGG AACGACTTCT ACCACGAAAT GAAGGACTCG
AACGTTCTCG ACAAGGTCGC GCTGGTGTAC GGCCAGATGA ACGAGCCGCC GGGCAACCGT
CTGCGCGTCG CGCTGACGGG CCTCACGATG GCCGAGCACT TCCGTGACGA AGGCCTCGAC
GTGCTGTTCT TCGTCGACAA CATCTACCGT TTCACGCTGG CCGGTACCGA AGTGTCGGCG
CTGCTCGGCC GTATGCCGTC GGCAGTGGGC TATCAGCCGA CGCTGGCTGA AGAAATGGGC
AAGCTGCAAG AGCGCATCAC GTCGACGAAG AAAGGCTCGA TCACGTCGGT TCAGGCCGTG
TACGTGCCTG CGGACGACTT GACCGACCCG TCGCCGGCCA CCACCTTCGG CCACTTGGAC
GCAACCGTCG TTCTGTCGCG TGACATCGCA TCGCTCGGTA TCTATCCGGC CGTCGACCCG
CTCGACTCGA CGTCGCGCCA GATCGACCCG AACGTGATCG GCGAAGAGCA CTACTCGATC
ACCCGCCGCG TTCAGCAGAC GCTGCAGCGC TACAAGGAAC TGCGCGACAT CATCGCGATT
CTGGGCATGG ACGAGCTGTC GCCGGAAGAC AAGCTGTCGG TTGCGCGCGC ACGTAAGATC
CAGCGTTTCC TGTCGCAGCC GTTCCACGTC GCCGAAGTGT TCACGGGCTC GCCGGGCAAG
TACGTGCCCC TGAAGGAAAC GATCCGCGGC TTCAAGATGA TCGTCGACGG CGAGTGCGAC
CACCTGCCGG AACAGGCGTT CTACATGGTC GGCACGATCG ACGAAGCCTT CGAGAAGGCC
AAGAAGATCC AGTAA
 
Protein sequence
MSTAALVEGK IVQCIGAVID VEFPRESMPK IYDALILEGS ELTLEVQQQL GDGVVRTICL 
GASDGLRRGV VVKNTGNPIS VPVGKPTLGR IMDVLGRPID EAGPIESENK RSIHQKAPAF
DELSPSTELL ETGIKVIDLI CPFAKGGKVG LFGGAGVGKT VNMMELINNI AKEHGGYSVF
AGVGERTREG NDFYHEMKDS NVLDKVALVY GQMNEPPGNR LRVALTGLTM AEHFRDEGLD
VLFFVDNIYR FTLAGTEVSA LLGRMPSAVG YQPTLAEEMG KLQERITSTK KGSITSVQAV
YVPADDLTDP SPATTFGHLD ATVVLSRDIA SLGIYPAVDP LDSTSRQIDP NVIGEEHYSI
TRRVQQTLQR YKELRDIIAI LGMDELSPED KLSVARARKI QRFLSQPFHV AEVFTGSPGK
YVPLKETIRG FKMIVDGECD HLPEQAFYMV GTIDEAFEKA KKIQ