| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_4031 |
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| Symbol | |
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| ID | 4899811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3934379 |
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| End bp | 3935518 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640137257 |
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| Product | putative periplasmic substrate-binding protein |
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| Protein accession | YP_001068250 |
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| Protein GI | 126451657 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACACA CGATGAAAAA GCTGGCAGGC GCGACGTTCG TCGCGGTCAT GTCGCTCGCG
GGGACGGCGC ACGCGGATGA CGTCAAGATC GGCTTTGCCG CGCCGATGAC GGGCGCGCAG
GCGCACTACG GCAAGGATAT GCAGAACGGG ATCGTGCTCG CGATCGAGGA CATCAACGCG
ACGAAGCCGA CGATCGGCGG CAAGCCGGTG AAGTTCGTGC TCGACACGCA GGACGATCAG
GCCGACCCGC GCACCGGCAC GACGGTCGCG CAGAAGCTCG TCGACGACGG CATCAAGGGC
ATGCTCGGCC ACTTCAACTC GGGCACGACG ATTCCGGCTT CGCGCATCTA CGCGAACGCG
GGCATCCCGC AGATCGCGAT GGCGACGGCG CCCGAGTACA CGACGCAGGG CTACAAGACG
ACCTTCCGGA TGATGACGTC CGACACGCAG CAGGGCTCGG TCGCGGGCAC GTTCGCGGTG
AAGGATCTCG GCATGAAGAA GATCGCGATC GTCGACGATC GCACCGCTTA CGGCCAGGGC
CTTGCCGACC AGTTCGAGAA GGCGGCGAAG GCGGCGGGCG CGACGATCGT CGATCGTGAA
TTCACGAACG ACAAGGCTGT CGACTTCAAG GCGATCCTGA CGAAGCTCAA GGCGACGAAG
CCGGACCTCG TCTACTACGG CGGCGCGGAT TCGCAGGCCG CGCCGATGGC CAAGCAGATG
AAGTCGCTCG GCGTCACGGC GCCGCTGATG GGCGGCGAGA TGGTGCACAC GCCGACCTTC
CTGAAGATCG CGGGCGACGC GGCCGAAGGC TCGATCGCTT CGCTCGCCGG CCTGCCGCTC
GCCGAAATGC CCGGCGGCAA GGCGTACGCG GACAAGTACA AGAAGCGCTT CGGCGAAGAC
GTGCAGACGT ACTCGCCGTA TGCGTACGAC GGCGCGATGG CGATGTTCAG CGCGATGAAG
AAGGCAAACT CGACGGACCC GGCGAAGTAT CTGCCGCTGC TCGCGAAGAC CGACATGGCG
GGCGTGACGT CGACGCACAT CGCGTATGAC GCGAAGGGCG ACCTGAGGAA CGGCGGCATC
ACGATGTACA AGGTCGAGAA GGGCGAATGG AAGCCCCTGA AGAGCATCGG CGGCAAGTAA
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| Protein sequence | MQHTMKKLAG ATFVAVMSLA GTAHADDVKI GFAAPMTGAQ AHYGKDMQNG IVLAIEDINA
TKPTIGGKPV KFVLDTQDDQ ADPRTGTTVA QKLVDDGIKG MLGHFNSGTT IPASRIYANA
GIPQIAMATA PEYTTQGYKT TFRMMTSDTQ QGSVAGTFAV KDLGMKKIAI VDDRTAYGQG
LADQFEKAAK AAGATIVDRE FTNDKAVDFK AILTKLKATK PDLVYYGGAD SQAAPMAKQM
KSLGVTAPLM GGEMVHTPTF LKIAGDAAEG SIASLAGLPL AEMPGGKAYA DKYKKRFGED
VQTYSPYAYD GAMAMFSAMK KANSTDPAKY LPLLAKTDMA GVTSTHIAYD AKGDLRNGGI
TMYKVEKGEW KPLKSIGGK
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