Gene BURPS1106A_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_3965 
Symbol 
ID4901001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand+ 
Start bp3869861 
End bp3870484 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID640137191 
ProductLysE family translocator protein 
Protein accessionYP_001068185 
Protein GI126453398 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTCG AAACCTGGCT CGCGTTCGCC GGCGCGAGCA TCGTGCTTCT GATGATTCCC 
GGCCCGACGA TCCTGCTCGT GATCGGCGAT TCGCTCGCGA ACCGCCATCG GTCGTCGTGG 
AGCACCGTCG CGGGCGTCGC GGCGGGCGAC ACCACCGCGA TGACGATCTC GCTCGCCGGC 
GCGGGCGCGC TGCTCGCGAT GTCGGCGGCC GCGTTCACCG CGCTCAAGCT TGTCGGCGGC 
GGCTATCTCG TCTATCTCGG CATCCGTTCG ATTCTGCATG CGCGCCGCAT CGGCGCGATG 
GACGTGCGCA TCGAGCGCCG TTCGGCGAAG CGGCGTTTCC TGTCCGCGTG GGCCGTCACC 
GCGCTCAATC CGAAGAGCAT CGTGTTCTTC GTCGCGTTCG TTCCGCAGTT CATCTCGCCG 
CACGAGACGT TCGCGCGGCA ATGCGCGATC CTGCTGCCGA CCTTCGTGTG CCTCGCGGCG 
ATCAACGCGG CCTGCTATGC GCGCATCGCG CGTTTCGCCG CTGCGCGGCT GACGGGCGCC 
ACCGCGCAGC GGCGCTTCGG GTACGGCGGG GGCGCCGCGC TGATCGGCGC GGGCGCATTG 
ACGCTCGGGA TGTCGCGAAG CTGA
 
Protein sequence
MSVETWLAFA GASIVLLMIP GPTILLVIGD SLANRHRSSW STVAGVAAGD TTAMTISLAG 
AGALLAMSAA AFTALKLVGG GYLVYLGIRS ILHARRIGAM DVRIERRSAK RRFLSAWAVT 
ALNPKSIVFF VAFVPQFISP HETFARQCAI LLPTFVCLAA INAACYARIA RFAAARLTGA 
TAQRRFGYGG GAALIGAGAL TLGMSRS