Gene BURPS1106A_3912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_3912 
Symbol 
ID4901613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand
Start bp3817799 
End bp3818941 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content65% 
IMG OID640137138 
Productputative amino acid ABC transporter, periplasmic amino acid-binding protein 
Protein accessionYP_001068132 
Protein GI126453227 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCA AGATGCAAAA GCTGCTGCCG ATCAGCGCGG CGGCTATGCT GTTGGCCGCA 
GCCGCCACGA ACGCAGCCGC CGACCAGGTC GTCAAGATCG GCCATGTCGC ACCGTTGACG
GGCGGCATCG CCCACCTTGG TAAGGACAAC GAAAATGGTG CGCGCCTCGC GGTCGAGGAG
ATCAACGCGA AGGGACTCAC GATCGGCGGC CAGAAGGTGA CGCTCCAGCT CGATGCACAG
GACGACGCGG CCGACCCGCG CACCGCGACG CAGGTCGCGC AGAAGCTCGT CGACGACAAG
GTCGTCGCGG TCGTCGGCCA CCTGAACTCG GGTACCTCGA TTCCGGCCTC GAAGATCTAC
AGCGATGCGG GCATCGTGCA GATCTCGCCG TCGGCGACGA ACCCGGCTTA CACGCAGCAA
GGTTTCAAGA CGACCTACCG CGTCGTCGCG ACCGACGCGC AGCAGGGCCC GGCGCTCGCG
AACTACGCGC GCTCGAAGGG CGTGAAGAGC GTCGCCGTCG TCGACGATTC GACGGCCTAC
GGCCAGGGCC TCGCGAACGA ATTCGAGAAG AAGGCGAAGG CGCTCGGCCT GAAGGTGGTG
TCGCACGACG CGACCAACGA CAAGGCGGTC GACTTCCGCG CGATCCTGAC GAAGATCAAG
GGTGAAAATC CGGACGCCGT GATGTACGGC GGCATGGACG CGACGGGCGG CCCGTTCGCG
AAGCAGGCGA AGCAGCTCGG CCTGCGCGCG AAGATCTTCG CGGGCGACGG CGTCTGCACG
GAAAAGCTCG CGGACCTCGC GGGCGATGCG ACCGACAACG TCGTGTGCTC GGAGGCGGGC
GCGTCGCTCG AGAAGATGCC GGGCGGCGCG GCATTCAAGG CGAAGTACGA GAAGCGTTTC
GGCCAGCCGA TCCAGATCTA CGCGCCGTTC ACGTATGACG CGGTGTACAT CATCGTCGAC
GCGATGAAGC GCGCGAACTC GACGGATCCG GCGAAGATCG TCGCGGCGAT GCCGAAGACG
AACTACACCG GCGTGATCGG CACGACGACC TTCGATTCGA AGGGCGACCT GCAGCACGGC
GTGATCTCGC TGTACGACTA CAAGGGCGGC AAGAAGACGT TCCTGGATGA AGTGAAGATG
TAA
 
Protein sequence
MNIKMQKLLP ISAAAMLLAA AATNAAADQV VKIGHVAPLT GGIAHLGKDN ENGARLAVEE 
INAKGLTIGG QKVTLQLDAQ DDAADPRTAT QVAQKLVDDK VVAVVGHLNS GTSIPASKIY
SDAGIVQISP SATNPAYTQQ GFKTTYRVVA TDAQQGPALA NYARSKGVKS VAVVDDSTAY
GQGLANEFEK KAKALGLKVV SHDATNDKAV DFRAILTKIK GENPDAVMYG GMDATGGPFA
KQAKQLGLRA KIFAGDGVCT EKLADLAGDA TDNVVCSEAG ASLEKMPGGA AFKAKYEKRF
GQPIQIYAPF TYDAVYIIVD AMKRANSTDP AKIVAAMPKT NYTGVIGTTT FDSKGDLQHG
VISLYDYKGG KKTFLDEVKM