Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3902 |
Symbol | |
ID | 4900240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3810040 |
End bp | 3810675 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640137128 |
Product | rare lipoprotein A family protein |
Protein accession | YP_001068122 |
Protein GI | 126451953 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTTC GATTACCGAG GCATCTCGGG ACTCTAGCTG TATTTTTCGC GCTGACAGGC TGCGCGGTGC CGCCGAACGC ACCGACCTCC GAGCAGGCGA AAAGCGCCGC GTCGAAGGAT GCGCTGCGCA CGGCCGCATC GGGCGCGGCC AGCAACAATA AGGAATCGGC GGGCGCGCCG CTGAACTTCG ACACGGCGCT CGCCTCGATG CCGGCCGCCG GCTCGCAGGA CGTCTCGCGC CAATCGCTCG CGGACGCGAA GCCGATCGAT GCCGCGGACA TCTCGGATTT CCGGCAGACC GGCCGCGCGT CATGGTACGG CAAGGGTTTT CACGGCCGCC GCACCGCGAA CGGCGAACGC TTCAACATGA ACGAATTCAC CGCCGCACAC CGGACGCTGC CGCTCGCGTC ATACGTGCGC GTGACGAACC AGGCGAACGG CAAGTCCGTC GTCGTGAAGA TCAATGATCG CGGTCCGTTC TCGCGCGGGC GGATCCTCGA TCTGTCGTAC GCGGCCGCGA AGGTGATCGG CCTGGTCCAT GCGGGTACCG CGCGCGTGAA GATCCAGGGG CTCTCGCCTG AAGAGGCGCG CGTCGCGCGC GACGAGATGC TCGCGTCGAA CAGCACGACG AAGTAA
|
Protein sequence | MKFRLPRHLG TLAVFFALTG CAVPPNAPTS EQAKSAASKD ALRTAASGAA SNNKESAGAP LNFDTALASM PAAGSQDVSR QSLADAKPID AADISDFRQT GRASWYGKGF HGRRTANGER FNMNEFTAAH RTLPLASYVR VTNQANGKSV VVKINDRGPF SRGRILDLSY AAAKVIGLVH AGTARVKIQG LSPEEARVAR DEMLASNSTT K
|
| |