| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3874 |
|---|
| Symbol | |
|---|
| ID | 4903123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 3770092 |
|---|
| End bp | 3771498 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640137100 |
|---|
| Product | amino acid permease |
|---|
| Protein accession | YP_001068095 |
|---|
| Protein GI | 126452964 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAG GACATTCGGA AACCGACCTA CACCGAGGGC TGGGGCAACG GCAGATGCGC
CTGATCGCGC TCGGCGCGGC GATCGGCGTC GGGCTCTTTC TCGGCTCGGC CAACGCGATC
AAGATGGCGG GCCCCGGCAT CATCCTGTCG TACATCATCG GCGGCGCGGT GATCTTCGTG
ATCATGCGCG CGCTCGGCGA GATGGCCGTG CACGAGCCGG TTGCCGGCTC GTTCAGCCGC
TACGCGCGCA ACTACCTCGG GCCGCTCGCC GGTTACCTGA CGGGCTGGAA CTACTGGTTC
CTCTGGCTCG TCACCTGCAT CGCCGAGATC ACGGCGGTCG GCATCTACAT GGGCATCTGG
TTCCCTGACG TGCCGCGCTG GATCTGGGCG CTCGCCGCGC TGGCGACGAT GGGATCGGTG
AACCTGCTCA CCGTGAAGGC GTATGGCGAA TTCGAATTCT GGTTCGCGCT GATCAAAGTG
GTGACGATCG TCGTGATGAT CGCAGTGGGC ATCGCGATGA TCGCGTTCGG CATCGGCAAT
CATGGCGTGC CGATGGGCAT CTCGAACCTG TGGGCGCACG GCGGCTTCTT CCCGAACGGC
GCGCAAGGCG TGCTGATGTC GATGCAGATG GTGATGTTCG CGTACCTCGG CGTCGAGATG
ATCGGGCTGA CGGCGGGCGA AGCGGCAAAT CCGCAGAAGA CGATTCCGGG CGCGATCAAC
TCGGTGTTCT GGCGCATTCT GCTCTTCTAC GGCGGCGCGC TCTTCGTGAT TCTGTCGATC
TACCCGTGGA ACGAGATCGG CACGCAGGGC AGCCCGTTCG TGATGACGTT CGAGCGGCTC
GGCATCAAGA CGGCGGCGGG CATCATCAAC TTCGTCGTGC TGACGGCGGC GCTTTCGTCA
TGCAACGGCG GCATCTTCAG CACGGGGCGG ATGCTGTACA ACCTCGCGCA GCAGGGCCAT
GCGCCGCGCA CGTTCGGCGA GACGACGGCG AGCGGCGTGC CGCGCCGGGC GATTCTGGTT
TCGATGGCGG CGCTGCTCGT GGGCGTGCTG TTGAACTACC TGGTGCCGGA GAAAGTGTTC
GTCTGGGTGA CGTCGATCTC GACATTCGGG GCGATCTGGA CATGGGGTGT CATTCTCGTC
ACGCAGATGA AGTTTCGCGC GAGCCTCGCG CCGGCGGAAG AGCGGGCGCT GCGGTTCCGG
ATGCCGTTCT GGCCGTACGC GTCCTGGGTC GCGCTCGCGT TTCTGGTGCT CGTGATCGGA
TTGATGGCCT ATTTTCCGGA TACGCGGATC GCGCTTTATG TCGGGCCGGC CTGGCTCGTG
TTGCTCGTGG TGCTGTATTT CGTGTTGAAG CTCGAGCCGG AGGGTGGCAA GGCTGCGGGG
CTGGAGCGCA GGTACGGGCG CGGGTGA
|
|---|
| Protein sequence | MQKGHSETDL HRGLGQRQMR LIALGAAIGV GLFLGSANAI KMAGPGIILS YIIGGAVIFV
IMRALGEMAV HEPVAGSFSR YARNYLGPLA GYLTGWNYWF LWLVTCIAEI TAVGIYMGIW
FPDVPRWIWA LAALATMGSV NLLTVKAYGE FEFWFALIKV VTIVVMIAVG IAMIAFGIGN
HGVPMGISNL WAHGGFFPNG AQGVLMSMQM VMFAYLGVEM IGLTAGEAAN PQKTIPGAIN
SVFWRILLFY GGALFVILSI YPWNEIGTQG SPFVMTFERL GIKTAAGIIN FVVLTAALSS
CNGGIFSTGR MLYNLAQQGH APRTFGETTA SGVPRRAILV SMAALLVGVL LNYLVPEKVF
VWVTSISTFG AIWTWGVILV TQMKFRASLA PAEERALRFR MPFWPYASWV ALAFLVLVIG
LMAYFPDTRI ALYVGPAWLV LLVVLYFVLK LEPEGGKAAG LERRYGRG
|
|---|
| |