Gene BURPS1106A_3861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_3861 
Symbol 
ID4900566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand- 
Start bp3763678 
End bp3764346 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID640137087 
ProductLysE family translocator protein 
Protein accessionYP_001068082 
Protein GI126455096 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0165555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGC ATACGTGGTG GCTGTTCGTC GCGACGGTGT TCGTCGTGTC GGCGATTCCC 
GGGCCGAACA TGTTGCTCGT GATGACGCAC GGTGCGCGTC ACGGGCTACG GCGTTCGACG 
GCGACGATGG CGGGCTGCAT GACGGCGCTC GTCGCGATGC TGTCGGTGTC CGCCGCGGGC 
CTCGGCGTGT TCCTCGAGGC GTGGCCCGCG ATGTTCGATG CGCTGCGTTT CGCGGGCGCC 
GCGTATCTGA TCTATCTGGG CGTGAAGGCA TGGCGCGCGC GCGTCGACGA GCCGTCCGAT 
GCGCAATCCA ATGCGCACGC CGAGGCCGCG GCGCCGCGCG CGGGCCGTTC GGGCTCGGCG 
GGCCAGGGGT CTCGTTGGGC GCTCTTTCGC AACGGCTTTC TCGTCGCGGG CAGCAATCCG 
AAGGCGATCC TGTTCGCCGC CGCGCTGCTG CCGCAGTTCA TCGATGCTTC CGCGCCGACG 
CTGCCGCAGT TCGGCATCCT CGTCGCGACG TTCGCGGTGA TCGAGGTGAG CTGGTACATC 
GTCTACGCGT CGTTCGGCAC GCGGATCGGC GTGACGCTGC GCAGCGCGAA CGTCGCGAAG 
GCGTTCAATC GGCTGACGGG CGGCCTGTTC GTCGGCTTCG GCGCGATGAT GGCGCTCGTG 
CGGCACTGA
 
Protein sequence
MNLHTWWLFV ATVFVVSAIP GPNMLLVMTH GARHGLRRST ATMAGCMTAL VAMLSVSAAG 
LGVFLEAWPA MFDALRFAGA AYLIYLGVKA WRARVDEPSD AQSNAHAEAA APRAGRSGSA 
GQGSRWALFR NGFLVAGSNP KAILFAAALL PQFIDASAPT LPQFGILVAT FAVIEVSWYI 
VYASFGTRIG VTLRSANVAK AFNRLTGGLF VGFGAMMALV RH