Gene BURPS1106A_3839 details

Gene Information

• Locus tag: BURPS1106A_3839
• Symbol: paaJ
• ID: 4900685
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 3739665
• End bp: 3740285
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 640137065
• Product: phenylacetate-CoA oxygenase, PaaJ subunit
• Protein accession: YP_001068060
• Protein GI: 126452809
• COG category: [R] General function prediction only
• COG ID: [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme
• TIGRFAM ID: [TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.61157
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCCT TCCCCGCCTC CGCCCTCGGC CAACCGACCG CCGCCGATGC CCGTGAGGGC 
CGGCGCCCCG TCACCGGCCG CGCCGCCGCG CCCGGCGACG ATCCGCTCGT CGAGCGCGCG 
TGGAGCGCGC TCGAAGCGGT GCCCGATCCC GAGATACCGG TCGTGTCGAT CCGCGAGCTC 
GGCATCCTGC GCGACGTGCG CCGCGCCTCG GACGGCGCCC TCGAAGTCGT GATCACGCCG 
ACCTATTCCG GCTGCCCGGC GATGCAGCAG ATCGCCGAGG ACATCGGCGC CGCGCTCCGG 
CAGGCGGGCA TCGCGCCGCA CCGAATCGCA ACCGTGCTCG CTCCCGCGTG GACGACCGAC 
TGGATCACCG CCGACGCCCG CGAGAAGCTC CGCGCATACG GCATCGCGCC GCCCGTCGGC 
CAATGCGGCG AGGCGCGCGG CACGCACGCG GCCGCGCCGC GCGTCGTGCG CTTCATGCCG 
AAGCCGCCGG CCGCGCCGCT CTGCCCGCGC TGCGGCTCCG CGCATACCGA GCGGCTCGCG 
CAATTCGCGT CGACCGCGTG CAAGGCGCTC TATCGCTGCC TCGACTGCCG CGAACCCTTC 
GACTACTTCA AACCTTATTG A 

 

Protein sequence

MPAFPASALG QPTAADAREG RRPVTGRAAA PGDDPLVERA WSALEAVPDP EIPVVSIREL 
GILRDVRRAS DGALEVVITP TYSGCPAMQQ IAEDIGAALR QAGIAPHRIA TVLAPAWTTD 
WITADAREKL RAYGIAPPVG QCGEARGTHA AAPRVVRFMP KPPAAPLCPR CGSAHTERLA 
QFASTACKAL YRCLDCREPF DYFKPY