| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3819 |
|---|
| Symbol | rplA |
|---|
| ID | 4902740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3725014 |
|---|
| End bp | 3725712 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640137045 |
|---|
| Product | 50S ribosomal protein L1 |
|---|
| Protein accession | YP_001068049 |
|---|
| Protein GI | 126452892 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0081] Ribosomal protein L1 |
|---|
| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA TCTCGAAGCG CCGTCAGGCA TTTGCCGCTA AGGTCGATCG CCAGAAGCTG
TATCCGATCG ACGATGCGCT CGCCCTCGTG AAGGAATGCG CGAGCGCGAA GTTCGACGAA
TCGATCGACG TCGCGGTTCA GCTCGGCATC GATGCGAAGA AGTCGGACCA GGTCGTTCGC
GGCTCGGTCG TGTTGCCGGC GGGTACGGGC AAGTCGGTTC GCGTCGCCGT GTTCGCGCAA
GGCGAAAAGG CTGAGCAGGC ACGCGCCGCA GGCGCCGAAG TGGTCGGTAT GGAAGACCTC
GCCGAGCAGA TCAAGGCCGG CCAAATGGAC TTCGATATCG TGATCGCTTC GCCGGACACG
ATGCGTATCG TCGGTACGTT GGGTCAGATC CTCGGCCCGC GCGGCCTGAT GCCGAACCCG
AAGGTCGGCA CGGTCACGCC GGACGTCGCG ACCGCGGTGA AGAACGCGAA GGCTGGCCAG
GTGCAGTTCC GCGTCGACAA GGCCGGCATC ATTCACGCGA CGATCGGCCG TGCGTCGTTC
GAGCCGACCG CGCTGCGCAC GAACCTCTCC GCGCTGATCG AAGCGCTGCA GAAGGCGAAG
CCGGCGACGA GCAAGGGCGT GTACCTGCGC AAGATCGCGC TGTCGAGCAC GATGGGCGTC
GGCGTTCGCG TCGACCAAGG CTCGCTGGCC GCGCAGTAA
|
|---|
| Protein sequence | MAKISKRRQA FAAKVDRQKL YPIDDALALV KECASAKFDE SIDVAVQLGI DAKKSDQVVR
GSVVLPAGTG KSVRVAVFAQ GEKAEQARAA GAEVVGMEDL AEQIKAGQMD FDIVIASPDT
MRIVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI IHATIGRASF
EPTALRTNLS ALIEALQKAK PATSKGVYLR KIALSSTMGV GVRVDQGSLA AQ
|
|---|
| |