Gene BURPS1106A_3810 details

Gene Information

• Locus tag: BURPS1106A_3810
• Symbol: recQ
• ID: 4902582
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: -
• Start bp: 3710478
• End bp: 3712325
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640137036
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001068040
• Protein GI: 126454768
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCGTT CGCTCGAAAT TCTCAACGAA GTCTTCGGCT ATCCCGCCTT CCGAGGTCAA 
CAGGGCGAGA TCGTCGAGCA CGTTGCGGCG GGCGGCGACT GTCTCGTGCT GATGCCCACG 
GGCGGCGGCA AGTCGCTCTG CTACCAGATT CCGGCGCTCG TGCGCAGCGA AGCGGGCCGC 
GGCGCGGGCA TCGTCGTGTC GCCGCTCATC GCGCTGATGC AGGATCAGGT CGCCGCATTG 
TCCGAGGTCG GCGTGCGCGC CGCGTATCTG AACTCGACGC TGTCGGGGGC CGAGGCGGCC 
GCGACCGAAC GCGCGCTGCG CGACGGCGAC ATCGATCTGC TCTACGTCGC GCCCGAGCGG 
CTGATGACGC CGCGCTTCCT CGATCTGCTC GAGCGCGCGC GCATCGGGCT TTTCGCGATC 
GACGAGGCGC ACTGCGTATC GCAGTGGGGG CACGATTTCC GGCCCGAGTA CATTCAGTTG 
TCGGTGCTGC ACGAGCGCTT TCCGGACGTG CCGCGGATCG CGCTGACCGC GACCGCCGAT 
GCGATCACCC GCGACGAGAT CGTGCAGCGT CTGGCGCTCG ACGACGCGCG AATCTTCGTG 
TCGAGCTTCG ACCGGCCGAA CATCCGCTAC CGGATCGTCG AAAAGGACAA CGCGCGCTCG 
CAGTTGCTCG ACTTCATTCG CGCAGAGCAT ACGAACGCCG ACGGTACGAC CGACGCCGGC 
GTCGTGTACT GCCTGTCGCG CCGCAAGGTC GAGGAGACGG CCGAATGGCT GAAGGCGCAA 
GGGGTTCGTG CGCTGCCGTA TCACGCGGGA ATGGAGTTCG AGATCCGGCA GAAGCACCAG 
GAGATGTTCC AGCGCGAGGA AGGGGTCGTG ATGTGCGCGA CGATCGCGTT CGGCATGGGC 
ATCGACAAGC CGGACGTGCG CTTCGTCGCA CACCTGGATC TGCCGAAGAG CGTCGAAGGC 
TATTACCAGG AGACCGGACG CGCGGGGCGC GACGGCCTGC CGGCGAACGC GTGGATGGCG 
TACGGGCTCG GCGACGTCGT TCAGCAGCGC AAGATGATCG ACGAATCGGA AGCCGACGAC 
ACGCACAAGC GTGTCCAGAC GTCGAAGCTC GACGCGCTGC TCGGGCTGTG CGAGACGGCA 
TCGTGCCGCC GCGTGCGGCT CCTCGCGTAT TTCGGCGAGA CGAGCGGCCC GTGCGGCAAC 
TGCGACACCT GCCTCGAGCC GCCGGCGACA TGGGACGCGA CGCGCGAAGC GCAGATGGCG 
CTGTCGTGCG TATTCCGCGC GCAGCGCGCA AGCGGCTTCA ATTTCGGCGC GAGCCATCTG 
ATCGAAGTGC TGCGCGGTGC GCGGACCGAG AAGGTCCAGC AACGCGGCCA CGACAGTCTC 
AGCACGTTCG GCATCGGCGC CGAGTTGTCC GAAGCCGAAT GGCGCGCGAT CTTCCGGCAG 
CTCGTCGCGT TCGGCTATCT CGCCGTCGAC CACGGCGGCT TCGGCGCGCT CGTGCTGACG 
GAGGCGAGCA AGCCGGTGCT CAAGGGCGAA GAGAAGGTCA CGCTGCGCCG CTACGTGAAG 
CCGGCGCGCA CACGGCAGTC CTCCGGCCGC AGCGGCGCGC GCGTCGATCC GACGGCCGGC 
ATGAGCGCGC GCGAGCGCGC GTGCTGGGAG CGCCTGCGCG CGTGGCGCGC GGAAACGGCG 
AAGAGCGACG GCGTGCCTGC GTACGTGATC TTCCACGACG CGACGCTCGC GGAGATCGCG 
CGCAACGCGC CCGAATCGAT CGACGATCTG CGCCATATCC CCGGAATCGG CGCGCGCAAG 
CTCGATCGCT TCGGCGACGA GATTCTCGAG GTCGTCGAAT CGGCCTGA 

 

Protein sequence

MSRSLEILNE VFGYPAFRGQ QGEIVEHVAA GGDCLVLMPT GGGKSLCYQI PALVRSEAGR 
GAGIVVSPLI ALMQDQVAAL SEVGVRAAYL NSTLSGAEAA ATERALRDGD IDLLYVAPER 
LMTPRFLDLL ERARIGLFAI DEAHCVSQWG HDFRPEYIQL SVLHERFPDV PRIALTATAD 
AITRDEIVQR LALDDARIFV SSFDRPNIRY RIVEKDNARS QLLDFIRAEH TNADGTTDAG 
VVYCLSRRKV EETAEWLKAQ GVRALPYHAG MEFEIRQKHQ EMFQREEGVV MCATIAFGMG 
IDKPDVRFVA HLDLPKSVEG YYQETGRAGR DGLPANAWMA YGLGDVVQQR KMIDESEADD 
THKRVQTSKL DALLGLCETA SCRRVRLLAY FGETSGPCGN CDTCLEPPAT WDATREAQMA 
LSCVFRAQRA SGFNFGASHL IEVLRGARTE KVQQRGHDSL STFGIGAELS EAEWRAIFRQ 
LVAFGYLAVD HGGFGALVLT EASKPVLKGE EKVTLRRYVK PARTRQSSGR SGARVDPTAG 
MSARERACWE RLRAWRAETA KSDGVPAYVI FHDATLAEIA RNAPESIDDL RHIPGIGARK 
LDRFGDEILE VVESA