Gene BURPS1106A_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_3803 
SymbolrplD 
ID4902035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand- 
Start bp3703854 
End bp3704474 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content61% 
IMG OID640137029 
Product50S ribosomal protein L4 
Protein accessionYP_001068033 
Protein GI126454667 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00357081 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCA AGCTCCTGAA TTCGAATGGT CAGGAAGGTG CGGTGGTCAA CGCGTCGGAC 
GTCGTGTTCG GCCGTGACTA CAACGAAGCG CTGATCCACC AGGTCGTCGT CGCTTATCAG 
GCGAACGCTC GCCAGGGCAA TCGCGCGCAG AAGGATCGCG AGCAAGTCAA GCACACGACG 
AAGAAGCCGT GGCGCCAGAA GGGTACGGGC CGCGCTCGTG CCGGTATGTC GTCGAGCCCG 
TTGTGGCGTG GCGGTGGTCG GATTTTCCCG AACTCGCCCG ACGAAAACTT CTCGCACAAG 
GTCAACAAGA AGATGCATCG CGCAGGTCTC TGCTCGATCT TCTCGCAGCT GGCCCGCGAA 
GGCCGTCTGT CGGTCGTCGA GGACATCGTT CTCGAAGCGC CGAAGACCAA GCTGCTGGCC 
GACAAGTTCA AGGCCATGGG TCTCGATTCC GTGCTCGTCA TCACCGACAC GGTCGACGAA 
AACCTGTACC TCGCGTCGCG CAACCTGCCC CACGTGGCGG TTGTCGAGCC GCGCTACGCT 
GACCCGCTGT CGCTGATCTA CTTCAAGAAA GTGCTGGTCA CGAAGGCTGC GGTCGCCCAG 
ATCGAGGAGT TGCTGTCATG A
 
Protein sequence
MELKLLNSNG QEGAVVNASD VVFGRDYNEA LIHQVVVAYQ ANARQGNRAQ KDREQVKHTT 
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPDENFSHK VNKKMHRAGL CSIFSQLARE 
GRLSVVEDIV LEAPKTKLLA DKFKAMGLDS VLVITDTVDE NLYLASRNLP HVAVVEPRYA 
DPLSLIYFKK VLVTKAAVAQ IEELLS