Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3792 |
Symbol | rplE |
ID | 4901795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3698828 |
End bp | 3699367 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640137018 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001068022 |
Protein GI | 126454010 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0743065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTT TTCAAGAGTT TTACAAAGAG AAGGTTGTTC CCGGCCTGAT CGAGAAGTTC GGCTACAAGT CGGTCATGGA AGTGCCGCGC ATCACCAAGA TCACCCTGAA CATGGGGCTT GGCGAGGCGG TTGCCGACAA GAAGATCATC GAGAACGCCG TGGGCGATCT GACGAAGATC GCGGGCCAGA AGCCCGTCGT GACGAAGGCT CGCAAGGCAA TCGCGGGCTT CAAGATCCGT CAGGGCTACC CGATCGGCGC GATGGTCACG CTGCGTGGCC GCGCGATGTA TGAATTCCTC GATCGTTTCG TGACGGTTGC CCTGCCCCGC GTGCGCGACT TCCGCGGCGT GTCGGGTCGT GCTTTCGACG GCCGCGGCAA CTACAACATC GGTGTGAAAG AGCAGATCAT TTTCCCCGAA ATCGATTACG ACAAGATCGA CGCGCTGCGT GGGCTGAACA TCAGCATCAC GACGACCGCG AAGACCGACG ACGAAGCGAA GGCTCTGCTC GCCAGCTTCA AGTTCCCGTT CAGAAACTGA
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Protein sequence | MARFQEFYKE KVVPGLIEKF GYKSVMEVPR ITKITLNMGL GEAVADKKII ENAVGDLTKI AGQKPVVTKA RKAIAGFKIR QGYPIGAMVT LRGRAMYEFL DRFVTVALPR VRDFRGVSGR AFDGRGNYNI GVKEQIIFPE IDYDKIDALR GLNISITTTA KTDDEAKALL ASFKFPFRN
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