| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3766 |
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| Symbol | lysA |
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| ID | 4899542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3678660 |
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| End bp | 3679931 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640136992 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001067996 |
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| Protein GI | 126453755 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.795007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG CTGCATTCGA CTACGTCGAC GGCGCGCTCC ACGCCGAGCG CGTGAGCACC
GTCGAGCTCG CCGAGCGTTT CGGCACCCCG CTCTTCGTCT ATTCGCGCGC CGCGCTCACC
GCGGCCTACG AGGCCTACGC GAAAGCCTGC GCCGGCCGCC GCGCGTCGAT TCACGTCGCC
GTGAAGGCGA ACAGCAACCT CGGCGTGCTG AACGTGTTCG CGCGTCTCGG CGCGGGCTTC
GACATCGTGT CGGGCGGCGA GCTCGCGCGC GTGCTCGCGG CGGGCGGCCG CGCGCGGGAC
GTCGTGTTCT CGGGCGTCGG CAAGAGCGCC GACGAAATGC GCGTCGCACT CGAAGCAGGC
GTGAAGTGCT TCAACGTCGA ATCGATCCCG GAGCTCGACC GGCTGAACGC CGTCGCGGCA
TCGCTCGGCA AGCGCGCGCC CGTGTCGCTG CGGGTGAATC CGGACGTCGA CCCGAAGACG
CATCCGTACA TCTCGACGGG GCTGAAGGCA AACAAGTTCG GTATCGCGTT CGACGACGCG
CGCGCGACGT ACCGCGCGGC CGCCGCGCTG CCGAACCTCG AAGTCGTCGG CATCGACTGC
CACATCGGCT CGCAGATCAC CGAGCTGAGC CCGTACCTCG ACGCGATCGA CAAGCTGCTC
GATCTCGTCG AGCGGATCGA GGCGGACGGC GTGCAGATCC ATCACGTCGA CGTCGGCGGA
GGGCTCGGCA TCACGTATGA CGACGAAACG CCGCCCGACA TCGGCGCCTA CGTGCGCGCG
GTGCTCGCGC GCATCGATGC GCGCGGCCAC GGCCAGCGCG AAATCTGGTT CGAGCCGGGC
CGCTCGCTGA CGGGCAACGC CGGCATTCTG CTCACGCGCG TCGAATTCCT GAAGCAGGGC
GAAGAGAAGA ACTTCGCGAT CGTCGACGCG GCGATGAACG ACCTCGCGCG CCCCGCGATG
TACCAGGCGT TTCACGCGAT CGTGCCGGTT GCGCCGCGCA CGGACGTCGC GGCCGCGGTG
TACGACATCG TCGGTCCCGT CTGCGAGAGC GGCGACTGGC TTGGGCGCGA GCGCTCGCTC
GCGATCGCGC CCGGCGATCT GCTCGCGATC CGCTCGGCGG GCGCGTATGG CTTCACGATG
AGCTCGAACT ACAATACGCG GCCGCGCGCG GCGGAAGTGA TCGTCGATGG CGCGAACGCG
CATCTGGTAC GGCCGCGCGA GACGGTCGAA AGCCTGTTCG AGCACGAAAC GATCCTGCCC
GAAGGCCGGT AA
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| Protein sequence | MTQAAFDYVD GALHAERVST VELAERFGTP LFVYSRAALT AAYEAYAKAC AGRRASIHVA
VKANSNLGVL NVFARLGAGF DIVSGGELAR VLAAGGRARD VVFSGVGKSA DEMRVALEAG
VKCFNVESIP ELDRLNAVAA SLGKRAPVSL RVNPDVDPKT HPYISTGLKA NKFGIAFDDA
RATYRAAAAL PNLEVVGIDC HIGSQITELS PYLDAIDKLL DLVERIEADG VQIHHVDVGG
GLGITYDDET PPDIGAYVRA VLARIDARGH GQREIWFEPG RSLTGNAGIL LTRVEFLKQG
EEKNFAIVDA AMNDLARPAM YQAFHAIVPV APRTDVAAAV YDIVGPVCES GDWLGRERSL
AIAPGDLLAI RSAGAYGFTM SSNYNTRPRA AEVIVDGANA HLVRPRETVE SLFEHETILP
EGR
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