Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3758 |
Symbol | aroK |
ID | 4902513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3670303 |
End bp | 3670836 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640136984 |
Product | shikimate kinase |
Protein accession | YP_001067988 |
Protein GI | 126454778 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.485321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGTAA TTTTCGTCGG GCTCATGGGG GCGGGTAAGA CCACCGTGGG CCGGGCGGTC GCGCGCCGGC TCGACAGACC CTTCTTCGAT TCGGATCACG AGATCGAGGC GCGCACCGGC GCGCGCATTC CGGTCATCTT CGAACTCGAG GGCGAAGCGG GCTTCCGTGA CCGCGAGGCG CAGATGATCG CCGAGCTCAC GCAGCGCGAG AACATCGTGC TGGCGACAGG CGGCGGCGCG ATCCTGCGCC CCGAGAACCG CAAGCTGCTT CACGAACGGG GCCTCGTCGT CTATCTGCGC GCGAATCCGC ACGATCTCTG GCTGCGCACC CGCAAGGACA AGAATCGCCC GCTGTTGCAG ACCGACGATC CGAAAGCCAA GCTCGAAGCG CTGTACGAAG CGCGCGATCC GCTCTACCGC GAATGCGCGC ACTTCGTCAT CGAAACCGGG CGGCCGTCCG TCAACGGGCT CGTCAACATG GTGCTGATGC AGCTCGAAAT GGCGGGCATC GTCGCCAAGC CACTCCAAGC ATGA
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Protein sequence | MNVIFVGLMG AGKTTVGRAV ARRLDRPFFD SDHEIEARTG ARIPVIFELE GEAGFRDREA QMIAELTQRE NIVLATGGGA ILRPENRKLL HERGLVVYLR ANPHDLWLRT RKDKNRPLLQ TDDPKAKLEA LYEARDPLYR ECAHFVIETG RPSVNGLVNM VLMQLEMAGI VAKPLQA
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