Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3732 |
Symbol | |
ID | 4903077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3642903 |
End bp | 3643913 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640136958 |
Product | VacJ family lipoprotein |
Protein accession | YP_001067962 |
Protein GI | 126451844 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.780492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACGCCG CGCAAGCGGC ATACGAGAGA AGAAAAGAGG GGAAGAACAT CATGCAGACG ATCCGCATCA GCCCAGCGGT GCTGGCGATC ACGGCCGCCG CGGCATTGAG CGGTTGCGCG ACAGTCCAGA CGCCGACCAA GGGCGACCCG TTCGAAGGCT TCAACCGGAC GATGTACACG TTCAACGACA AGGTCGACCA GTACGCGCTC AAGCCGGTCG CGCGCGGCTA TCAGTGGGCG GTGCCGCAGC CGATGCGCGA CAGCGTGACG AACTTCTTCT CGAACATCGG CGACGTCTAC ATCGCCGCGA ACAACCTCGT GCAGCTGAAG ATCGCCGACG GTGTCGGCGA CATCATGCGG GTCGTGATCA ACACGGTGTT CGGCGTGGGC GGCCTGTTCG ACGTCGCGAC GCTCGCGAAG CTGCCGAAAC ACGCGAACGA CTTCGGCGTG ACGCTCGGCC ACTACGGTGT GCCGAGCGGC CCGTACCTCG TGCTGCCGCT GCTCGGCCCG AGCACCGTGC GCGACACGGC GGGCCTCGCC GTCGACTACG CGGGCAACCC GCTTACCTAT GTACGGCCCG ACGGCGTGAG CTGGGGCCTG TTCGGGCTGA ACCTCGTGAA CACGCGCGCG AACCTGCTCG GCGCGGGCGA CGTGCTCGAG GCAGCCGCGA TCGACAAGTA TTCGTTCGTG CGCAACGCGT ACCTGCAGCG CCGCCAGGCG CTGATCGGCG GCGCCACGGG CGCGCAGTCG AACCTGCCGG ATTACGGCAG CGAGGCGCCG CCGCCGAATT ACGAGATGCC GGAAGAGGGC GCCGCGGCGC CCGCGAGCGG CGCGGCATCG GCGCCGGCCG CCGCTTCCGC GCCCACGGCG GCGTCCGGTG CGGCGCCGGG CGCCGCCGAG CCCGCATCGG CCGCGGCGCC GAATCCGAGC AGCGCGACGA ACGTGCCCGC TCAGCAGGTC GTGCCGCCGT CGCCGGGCGG CATCCGTTTC CCGAGCATCC GGCTGCACTG A
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Protein sequence | MNAAQAAYER RKEGKNIMQT IRISPAVLAI TAAAALSGCA TVQTPTKGDP FEGFNRTMYT FNDKVDQYAL KPVARGYQWA VPQPMRDSVT NFFSNIGDVY IAANNLVQLK IADGVGDIMR VVINTVFGVG GLFDVATLAK LPKHANDFGV TLGHYGVPSG PYLVLPLLGP STVRDTAGLA VDYAGNPLTY VRPDGVSWGL FGLNLVNTRA NLLGAGDVLE AAAIDKYSFV RNAYLQRRQA LIGGATGAQS NLPDYGSEAP PPNYEMPEEG AAAPASGAAS APAAASAPTA ASGAAPGAAE PASAAAPNPS SATNVPAQQV VPPSPGGIRF PSIRLH
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