| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3665 |
|---|
| Symbol | |
|---|
| ID | 4899980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 3566930 |
|---|
| End bp | 3567715 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640136891 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001067896 |
|---|
| Protein GI | 126452435 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACG CGCCCTCCCT CTTCGGCGGC AACACGCCGC CCCCCGCGCC GCAAACGGCT
TCGTCGACCG ACGCCGGCTT CCAGGCGCGC TCGCTCGTCG ATCTGCTGTA CGACGGCTTC
TTCATGCTGT TCCTGCTGAA GAACGGCCGC GAGCCGAACG ACGCGTCGGA ATTCGGCACG
CGCATTCAGG AATTCCTGAG CGAGTTCGAA CGCGGCGCGA AGAAGCTCAA CATCGCCGCC
GACGACGTCT ATGCGGCGAA GTTCGCGTTT TGCGCGGCGA TCGACGAATC GGTGCTGTCG
TCGCCGTTCA AGATCCGCGC GGACTGGGAG CGCCGGCCGT TGCAGCTCGT GCTGTTCGGC
GAGCAACTCG CGGGCGAGAA GTTCTATCAG TACCTCGAAG AATGCCGCGC ACAGGGCGCG
GCGCGGCTGC AGTCGCTCGA GGTGTTCCAT ATGTGCCTGC TGCTCGGCTT CCAGGGCAAG
TATCTGCTCG AAGGGCCGGA AAAGCTCGCG TATCTGACCG CACGGCTTGG CGACGAGATC
GCGAACATGA AGGGCAAGCG CGCACCGTTC GCGCCGCATT GGCCGCTGCC GGACCAGATC
TCGCACCGGC TCAAGCGCGA GGTGCCGCTG TGGGCGATCG GAGCGGTGTT CGCGCTCGTC
GGGCTGCTGG CGTTCGTCGG GCTGAATACG TATTTGAAAG ACAGCACCGT GCGGGCGCTC
GCGCCTTATT CGCAAGTCAT CAAGGTGGGG CCGGAGTCGG CTAATTTGAC GATTTCGTTG
CCTTGA
|
|---|
| Protein sequence | MSYAPSLFGG NTPPPAPQTA SSTDAGFQAR SLVDLLYDGF FMLFLLKNGR EPNDASEFGT
RIQEFLSEFE RGAKKLNIAA DDVYAAKFAF CAAIDESVLS SPFKIRADWE RRPLQLVLFG
EQLAGEKFYQ YLEECRAQGA ARLQSLEVFH MCLLLGFQGK YLLEGPEKLA YLTARLGDEI
ANMKGKRAPF APHWPLPDQI SHRLKREVPL WAIGAVFALV GLLAFVGLNT YLKDSTVRAL
APYSQVIKVG PESANLTISL P
|
|---|
| |