Gene BURPS1106A_3663 details

Gene Information

• Locus tag: BURPS1106A_3663
• ID: 4902463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 3564876
• End bp: 3565478
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640136889
• Product: putative lipoprotein
• Protein accession: YP_001067894
• Protein GI: 126455022
• COG category: [S] Function unknown
• COG ID: [COG3521] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03352] type VI secretion lipoprotein, VC_A0113 family

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.353625
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTCGTT ACGCGCTGCC GCTCGCCGCC TGCATTCTGC TCGGCGGCTG CGCGGCCGCC 
GTGCCGCTCC TCGGTTCGGC GGGCAGCGCC GCGCTGCAGA TGGTGGGCGT CGGCAAACCC 
GACGTGCCCG ATTCGCAGAA GCCGCCGCGC AATCTCGGCC TCACGCTCTA TGCGGCACAG 
AACCTCAACG CCGCGAACGA CAACCGTCCG CTCGCGCTCG TCGTGCGCCT CTACGCGCTG 
AAAGATCCGA CGTCGTTCCA GCAGGCGCCG TTCGACAGCT TCACCGATCC GACGAAAGAA 
AAGACCGCGC TCGGCGCCGA TCTGCTGAGC GTGCGCGAAA TCACGCTGAT TCCGGGGCAG 
CACTACAACG CGACCGAAAA GGTGTCGCGC GAAGCGCAGG CATTCGGCGT CGTCGCGCTT 
TTTCGCGATC CGGCGCTACA ACGCTGGAAA CTAACTTTCG ATCCGGCGAA ATCCGAGAAA 
TCCGGCATAA TCATTGGCCT GCACAACTGC GCGATGACCG TGACGGGCGG CACCGTCATC 
CCTTCGCAGC AAGGCATGCC GACGCAGCGG CTCGATTTGC TGTCGTCGGT GAACTGCGGG 
TGA 

 

Protein sequence

MTRYALPLAA CILLGGCAAA VPLLGSAGSA ALQMVGVGKP DVPDSQKPPR NLGLTLYAAQ 
NLNAANDNRP LALVVRLYAL KDPTSFQQAP FDSFTDPTKE KTALGADLLS VREITLIPGQ 
HYNATEKVSR EAQAFGVVAL FRDPALQRWK LTFDPAKSEK SGIIIGLHNC AMTVTGGTVI 
PSQQGMPTQR LDLLSSVNCG