Gene BURPS1106A_3617 details

Gene Information

• Locus tag: BURPS1106A_3617
• Symbol: ubiX
• ID: 4899895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 3520010
• End bp: 3520606
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640136843
• Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
• Protein accession: YP_001067848
• Protein GI: 126452074
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCCCC GTCCGGCGCC GCCGCGGCGC CTGATCGTCG CGATCACGGG TGCCACCGGC 
GCGATCTATG GCGTGCGCAT GCTCGACATG CTGCGCGCGT CGGGCGGCGT CGAGACGCAC 
CTGCTGATCT CGAGCGCCGG CTGGCTCAAC ATCCGGCACG AACTGCAACT GTCGAAGGAC 
GACGTGCTGG CGCGCGCCGA CGTCGTCCAT TCGGTGCGCG ACGTCGGCGC GAGCATTGCA 
TCCGGCTCGT TCGCGACCGA GGGCATGATC GTCGCGCCCT GCTCGATGAA GACGCTCGCG 
AGCATCGCGC ACGGGCTATC CGACAATCTC ATCACCCGCG CCGCCGACGT CGCGCTGAAA 
GAGCGCCGCC GGCTCGTGCT GCTCGTGCGC GAGGCGCCGT TCAACCTCGC GCACCTACGC 
AACATGACGG CCGTCACCGA GATGGGCGGC GTGATCTTCC CGCCGGTGCC CGCGTTCTAC 
GCGATGCCGA AGACGATCGA CGAGATCGTC GACCATACGG TCGCGCGCGT GCTCGACATG 
TTCGCGCTCG GCGCGCCGCT CACCGCGCCG TGGCAAGGGC TGCGCGAGCA CGGCTGA 

 

Protein sequence

MEPRPAPPRR LIVAITGATG AIYGVRMLDM LRASGGVETH LLISSAGWLN IRHELQLSKD 
DVLARADVVH SVRDVGASIA SGSFATEGMI VAPCSMKTLA SIAHGLSDNL ITRAADVALK 
ERRRLVLLVR EAPFNLAHLR NMTAVTEMGG VIFPPVPAFY AMPKTIDEIV DHTVARVLDM 
FALGAPLTAP WQGLREHG