| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3590 |
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| Symbol | |
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| ID | 4899255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3497062 |
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| End bp | 3498891 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640136816 |
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| Product | PDZ domain-containing protein |
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| Protein accession | YP_001067821 |
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| Protein GI | 126453535 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGA TTTGCTACAC GATCGTTCCG AAAGATCCCG CCGCGCACCT GTTCGAGGTG
ACGCTCACGC TCGCCGATCC GGACCCGGCG GGCCAGCGCT TCGCGCTGCC CGTATGGATT
CCGGGCAGCT ATATGGTGCG CGAGTTCGCG CGCAATATCG TGACGCTGCG TGCGTTCAAC
GAAGCGGGCC GCAAGCTGCG GATCGGCAAG CTCGACAAGC AGACCTGGCA GGCCGCGCCG
GCGCCCGGGC CGATCACGCT GCGCTACGAC GTCTACGCGT GGGACCTGTC GGTGCGCGCC
GCGCACCTGG ACGACACGGG CGGCTTCTTC AACGGCACGA GCGTGTTTCT CGCGCCGCTC
GGCCGCGAGG ATGCGCCGTG CGAGGTAATG ATCGAGCGGC CGGCGGGCGA CGCGTACCGG
CGCTGGCGCG TCGCGACGGC GCTGCCGGAG GCGCGCGGCA CGAAACGCTA CGGCTTCGGC
GCGTACCGCG CGGAGAATTA CGACGAGCTG ATCGATCATC CGGTCACGCT CGGCGAATTC
GCGCTCGCGT CGTTCGACGC GCACGGCGTG CCGCACGACA TCGCGATCGC GGGCCGCGTG
ACCGGGCTCG ATCTCGAGCG GCTCGCGGCC GACCTGAAGC GGGTGTGCGA GGCGCAGATC
GCGCTGTTCG AGCCGAAGAC CAGGCGCGCG CCGATGTCGC GCTACGTGTT CATGACGCAG
GCGGTCAGCG ACGGCTACGG CGGGCTCGAG CATCGCGCGT CGACGGCGCT CGTCTGCAAT
CGCACCGATC TGCCGGTGAA GGGGCGCCCT GAGAAGACGG ACGGCTATCG GACTTACCTC
GGCCTGTGCA GCCACGAGTA CTTCCATACA TGGAACGTGA AGCGGATCAA GCCGGCCGCG
TTCGCGCCGT ACGATCTGTC GCAGGAGAAT TACACGTCGC TGCTGTGGCT CTTCGAGGGC
TTCACGTCGT ACTACGACGA CCTGATGCTC GCGCGCAGCG GCCTCATCTC GCAGGACGAC
TATTTCGCGC TCGTCGGCCG CACGATCGCC GGCGTGCAGC GCGGCGCCGG CCGGCTCAGG
CAGAGCGTCG CCGAAAGCTC GTTCGATGCG TGGATCAAGT ATTACCGGCA GGACGAAAAC
GCGACGAACG CGATCGTCAG CTATTACACG AAGGGCTCGC TCGTCGCGCT CGCGTTCGAT
CTGGCGATTC GCGCGCGCAG CCGCCACCGC AAATCGCTCG ACGACGTGAT GCGGCTTTTG
TGGCAGCGCT TCGGGCGCGA CTTCTACCAC GGCAAGCCGC AAGGCGTCGG CGAGGACGAC
GTGAAGGCGC TGATCGCCGA AGCGACGGGT GTCGATCTCG GCCGTCTTTT CGACGAAGCG
GTGTCCGGCA CGCGCGATCT GCCGCTCGCC GAACTCTTCG AGCCGTTCGG CGTGACGCTC
GCGCCGGACG GGGGCGCGGG CGGCGCGGCC GATGCGCCCG CGAAGCCGAC GCTCGGCGCG
CGCACGCGCG GCGGCGCGGA ATGCACGCTC GCGGCCGTCT ACGAAGGCGG CGCCGCGCAT
CGGGCCGGGC TGTCCGCGGG CGACGCGCTC GTCGCGATCG ACGGGCTGCG CGTGACGGGC
TCGAACCTCG ACGCGCTGCT CGCGCGCTAC CGCGTCGGCG ACAAGGTCGA GATCCACGCA
TTCCGGCGCG ACGAACTGCG CGTGGTGCAG CTCAAGCTCG ACGGCCCGGA CATCGCGCGC
TACAAGCTGG CCGCTCAGCC GAAGCCCGCG GCCGCGCGCG CCCGTCGCGA CGCGTGGCTC
GGGCTGCCGG CGGCGCGCGG CGGTCGATAA
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| Protein sequence | MKPICYTIVP KDPAAHLFEV TLTLADPDPA GQRFALPVWI PGSYMVREFA RNIVTLRAFN
EAGRKLRIGK LDKQTWQAAP APGPITLRYD VYAWDLSVRA AHLDDTGGFF NGTSVFLAPL
GREDAPCEVM IERPAGDAYR RWRVATALPE ARGTKRYGFG AYRAENYDEL IDHPVTLGEF
ALASFDAHGV PHDIAIAGRV TGLDLERLAA DLKRVCEAQI ALFEPKTRRA PMSRYVFMTQ
AVSDGYGGLE HRASTALVCN RTDLPVKGRP EKTDGYRTYL GLCSHEYFHT WNVKRIKPAA
FAPYDLSQEN YTSLLWLFEG FTSYYDDLML ARSGLISQDD YFALVGRTIA GVQRGAGRLR
QSVAESSFDA WIKYYRQDEN ATNAIVSYYT KGSLVALAFD LAIRARSRHR KSLDDVMRLL
WQRFGRDFYH GKPQGVGEDD VKALIAEATG VDLGRLFDEA VSGTRDLPLA ELFEPFGVTL
APDGGAGGAA DAPAKPTLGA RTRGGAECTL AAVYEGGAAH RAGLSAGDAL VAIDGLRVTG
SNLDALLARY RVGDKVEIHA FRRDELRVVQ LKLDGPDIAR YKLAAQPKPA AARARRDAWL
GLPAARGGR
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