Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3548 |
Symbol | ddl |
ID | 4901283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3451447 |
End bp | 3452385 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640136774 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001067784 |
Protein GI | 126453261 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.21895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGGA TCGATCCGAA ACGTTTCGGC AAGGTGGCGG TGCTGCTCGG CGGGGATTCC GCCGAGCGCG AGGTATCGCT GAACTCTGGC CGGCTGGTGC TGCAGGGCCT GCGCGACGCG GGCATCGACG CGCATCCGTT CGATCCGGCG CAGCGGCCGC TCGCGGCGCT CAAGGACGAA GGCTTCGTGC GCGCGTTCAA CGCGCTGCAC GGCGGCTACG GCGAGAACGG CCAGATCCAG GGCGCGCTCG ATTTCTACGG CATCCGCTAC ACGGGCAGCG GCGTGCTCGG CTCGGCGCTC GGGCTCGACA AGTTCCGCAC GAAGCTCGTC TGGCAGCAGA CGGGCATTCC GACGCCGCCG TTCGAGACGG TGATGCGCGG CGACGATTAT GCGGCGCGCG CGCAGGACAT CGTCGCGAAG CTCGGCGTGC CGCTTTTCGT GAAGCCGGCG AGCGAGGGCT CGAGCGTCGC GGTCGAGAAG GTGAAAAGCG CCGATGCGTT GCCCGCCGCA CTGGAAGAAG CGGCGAAGCA CGACAAGATC GTGATCGTCG AGAAGAGCAT CGAAGGCGGC GGCGAATACA CCGCGTGCAT CGCCGCGGAC CTCGATCTGC CGCTCATCAG GATCGTGCCC GCGGGCGAGT TCTACGACTA TCACGCGAAG TACATCGCGA ACGACACGCA ATACCTGATT CCGTGCGGCC TCGACGCGGC AAAGGAAGCC GAGTTCAAGC GCATCGCGCG CCGCGCGTTC GACGTGCTCG GCTGCACGGA CTGGGGCCGC GCGGATTTCA TGCTCGACGC CGCGGGCAAC CCGTATTTCC TCGAAGTGAA CACCGCGCCG GGGATGACCG ATCACTCGCT GCCGCCGAAG GCGGCGCGCG CGGTGGGCAT CGGCTATTCG GAGCTGGTGG TGAAAGTGCT GTCGCTCACG CTCGATTGA
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Protein sequence | MSGIDPKRFG KVAVLLGGDS AEREVSLNSG RLVLQGLRDA GIDAHPFDPA QRPLAALKDE GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQTGIPTPP FETVMRGDDY AARAQDIVAK LGVPLFVKPA SEGSSVAVEK VKSADALPAA LEEAAKHDKI VIVEKSIEGG GEYTACIAAD LDLPLIRIVP AGEFYDYHAK YIANDTQYLI PCGLDAAKEA EFKRIARRAF DVLGCTDWGR ADFMLDAAGN PYFLEVNTAP GMTDHSLPPK AARAVGIGYS ELVVKVLSLT LD
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