| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3544 |
|---|
| Symbol | |
|---|
| ID | 4902000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3447418 |
|---|
| End bp | 3447924 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640136770 |
|---|
| Product | anti-oxidant AhpCTSA family protein |
|---|
| Protein accession | YP_001067780 |
|---|
| Protein GI | 126454386 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0678] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAG TGGGCGACAC GCTGCCCGAC GCGCAGCTCT TCGAGTACCT CGACGATGCG
CGCGCGGGCT GCACGCCGGG GCCGAACGCC TTTGGCGTGC GCGAGCAGAC GGCGGGAAAG
CGCGTGGTGA TCTTCGGATT GCCGGGCGCG TTCACGCCGA CTTGCTCGGC GCAGCATGTG
CCGGGCTACG TCGCGCATGC CGAGCCGTTG CGCTCGGCGG GCATCGACGA GATCTGGTGC
GTTGCCGTCA ACGACGCATT CGTGATGGGC GCTTGGGGAC GCGATCTGCA CACCGCGGGC
AAGGTGCGCA TGATGGCGGA CGGCAGCGCG GCTTTCACTC ATGCGCTGGG ACTGACGCAG
GACCTGTCCG CGCGTGGCAT GGGGATTCGC TCCCGACGCT ACGCGATGGT GGTCGACGAC
GGCGTGGTCA AGACGCTGTT CGTCGAAGCG CCGGGCAAGT TCGAAGTGAG CGATGCGGCC
AGCGTGCTGG CCGGTTTGAC GCGCTGA
|
|---|
| Protein sequence | MIQVGDTLPD AQLFEYLDDA RAGCTPGPNA FGVREQTAGK RVVIFGLPGA FTPTCSAQHV
PGYVAHAEPL RSAGIDEIWC VAVNDAFVMG AWGRDLHTAG KVRMMADGSA AFTHALGLTQ
DLSARGMGIR SRRYAMVVDD GVVKTLFVEA PGKFEVSDAA SVLAGLTR
|
|---|
| |