Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3470 |
Symbol | speE |
ID | 4901931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | + |
Start bp | 3377157 |
End bp | 3378014 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640136696 |
Product | spermidine synthase |
Protein accession | YP_001067707 |
Protein GI | 126454202 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGCACCA CCCTCCTCTT TCACCCGACT CCCGACGTCG CGTACGGCTT TCCGAACGCC CGGCGGCTCG CGCGCATCGA ATCCGAGTAT CAGGAGATCG AGGTCTGGGA AACATCGCTG CTCGGGCGGC TCTTCACGCT CGACGGCCGG CCGATGACGT CGGTCGGCGA CGAGTTCGTC TATCACGAAT GCATGACGCA TCCGGCCGCG CTCGCGCACC CGGCGCCGAA AAAAGCGCTC GTGCTCGGCG GCGGCGACGG CGGCGCCGCG CGCCAGCTGC TGCGGCATCC GTGCATCGAG CGGATCGTCG TCGCGGAGCT CGATGCGGCT GTCGTCGACA TGGCGCGCCG CTTTCTCGGC GACGTGCATC AGGGCGCGCT CGACGATCCG CGCGTCGAGC TCGCGATCGG CGACGCCGCG CGCTACGTCG ACCACGCGTG CGAGCACTTC GATCTCGCGG TGTTCGACCT GACGCCGCCC GACTCGCCCG CGGCGGGCCT CTATACGCCC GCGTTCTACA CGCGCCTGAA GCGCATCCTG ACGCCGCAGG GCGCGGTGTC GCTGCATCTG GGCTCGCCGC TTTATCACGG AGCGCGCATC GCCGCGCTGC TCGCCGGGCT GCGCGAGCGC TTCGCGGTCG TCGCGCCGCT TTGCGCGCAC GTGCCGCTGT ACGGCTCGCC TTGGCTGATG GCGATCGCGA GCGACACGCT CGACGCGGCT TCGCTGTTCT CGCACGACAT CGACGCGCGG CTCGCCGAGC GGCACATCGA AGGCCTGCGC TTCTACGACG CGAAGCTGCA TTCCGCACTC TTCACGCTGC CGCACGCGCT GCGCGATACT CTCGGCATGC ATCGCTAA
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Protein sequence | MSTTLLFHPT PDVAYGFPNA RRLARIESEY QEIEVWETSL LGRLFTLDGR PMTSVGDEFV YHECMTHPAA LAHPAPKKAL VLGGGDGGAA RQLLRHPCIE RIVVAELDAA VVDMARRFLG DVHQGALDDP RVELAIGDAA RYVDHACEHF DLAVFDLTPP DSPAAGLYTP AFYTRLKRIL TPQGAVSLHL GSPLYHGARI AALLAGLRER FAVVAPLCAH VPLYGSPWLM AIASDTLDAA SLFSHDIDAR LAERHIEGLR FYDAKLHSAL FTLPHALRDT LGMHR
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