Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3448 |
Symbol | holA |
ID | 4901646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3356977 |
End bp | 3358065 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640136674 |
Product | DNA polymerase III subunit delta |
Protein accession | YP_001067685 |
Protein GI | 126454183 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTGC GACTTGACGC GCTGGAGCCG CATCTCTCCA AGGGCCTGGC CGGACTGTAC GTCGTCTACG GCGACGAACC GCTGCTCGCG CAGGAGGCGT GCGACAAGAT CCGCGCCGCC GCGCGCGCGG CGGGCTTCAC CGAGCGTTCG GTGCACACCG TCGAGCGCGG CTTCGACTGG AGCACGCTGA TCGGCGCGAG CCAGGCGATG TCGCTGTTCG GCGAGCGGCA GCTCGTCGAG CTGCGGATTC CGTCCGGCAA GCCCGGCAAG GACGGCGCCG ACGCGCTGAA GACGCTCGCC GGCGCGGCCA ACCCGGACGT GCTGATGCTC GTCACGCTGC CGCGGCTCGA TGCGGCGACG CAGAAGTCCG CGTGGTTCAC GGCGCTCGCG AACGGCGGCG TCGCGCTGAA GATCGACCCC GTCGAGCGCG CGCAGTTGCC GAACTGGATC GGTCAGCGGC TCGCGCTGCA GGGGCAGCGG GTCGCCCCGG GCGACGACGG ACGGCGCGCG CTCGCGTTCG TCGCCGAGCG GGTCGAAGGC AATCTGCTCG CCGCGCATCA GGAAATCCAG AAGCTCGGCC TGCTGTATCC GGCCGGCGCG CTGACGTTCG AGCAGATCCA CGACGCGGTG CTGAACGTCG CGCGCTACGA CGTGTTCAAG CTCAACGAGG CGATGCTCGC GGGCGACGCC GCGCGGCTTT CGCGGATGAT CGACGGCCTG AAGGGCGAGG GCGAGGCGCT CGTGCTCGTG CTGTGGGCGG TCGTCGAGGA GTTGCGCACG CTGTTGCGGA TCAAGCGCGG CGTCGCGGCC GGCAAGCCGC TTGCCGTGCT CGTGCGCGAG AACCGCGTGT GGGGGCCGCG CGAGCGGCTC GTCGGGCCCG CGCTTTCGCG CGTATCGGAA GCGGCGCTCG AGCACGCGCT CGCGTTCGCC GCGCGGCTCG ACCGGCAGGT CAAGGGGTTG TCGGCCGTGT CGCGCGGCGC GGCGCGCGGC GAGCCGCCGC CCGATCCGTG GGACGGCCTG TTCCAGCTCG CGATGACCGT CGCGCGCGCG GCCGGGCCAG GCGGCGACGC GCCGCGCCGG CCCGCCTGA
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Protein sequence | MQLRLDALEP HLSKGLAGLY VVYGDEPLLA QEACDKIRAA ARAAGFTERS VHTVERGFDW STLIGASQAM SLFGERQLVE LRIPSGKPGK DGADALKTLA GAANPDVLML VTLPRLDAAT QKSAWFTALA NGGVALKIDP VERAQLPNWI GQRLALQGQR VAPGDDGRRA LAFVAERVEG NLLAAHQEIQ KLGLLYPAGA LTFEQIHDAV LNVARYDVFK LNEAMLAGDA ARLSRMIDGL KGEGEALVLV LWAVVEELRT LLRIKRGVAA GKPLAVLVRE NRVWGPRERL VGPALSRVSE AALEHALAFA ARLDRQVKGL SAVSRGAARG EPPPDPWDGL FQLAMTVARA AGPGGDAPRR PA
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