| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3435 |
|---|
| Symbol | |
|---|
| ID | 4899862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 3345692 |
|---|
| End bp | 3347098 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640136661 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_001067672 |
|---|
| Protein GI | 126454791 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACTC TGCGCACCTC CCTCCGAAGC GGCAACTGGC GCTCGCTTCT CGCGTGTTTC
CTTTATTTCG ATACGGGCTT CACCGTCTGG GTGCTGTACG GGCCGCTCGC GCCGTTCATC
AGCAAGGACA TCGCGATGAC GGCCGCGCAG CAAGGCTTTC TCGTCGCGGT GCCGGTGCTC
GCGGCGGCCA TCCTGCGCGT GACGCTCGGC AACCTTTACC AGTCCGCCGA CGGCCGGCGC
ATCGCGCTGA TGGGCGTACT GCTGTCCGCG CTGCCCGCCG CCGTGCTGCC GTTCGTGCCC
GGCACGCCGT CGTACACGCT GCTCCTCGTG CTCGGCGTGT TCCTCGGGAT CGGCGGCGCG
AGCTTCGCGG TCGCGCTGCC GATGGCGGGC AGCAGCTATC CGCCGAAGGT GCAGGGCCTC
GTGCTCGGCC TCGCCGCCGC GGGCAACATC GGCGCGGTGC TCGACGGCTT CATGTTCCCG
CACATCGCGG CCGCGCTCGA CTGGAAGTTC TCGACGGCCG CCGCGCTGCC GCTGCTCGCG
ATCGCGGGCT TCGCGCTCTT CGCGTGGGCC GACGACCGCG CAGAGAAATC GGGCAGCGCG
GCGCGCGCGT TCGGCGCGTT CGTGATCACG CTCGGCGGTC TCGTCGCGCT CGTGCTCGCC
GTGCACGCGG GCCTGTTCGG CGCGGGCAAG GCGGGCGTGC TGCTGCTGCC CGTGATGGGC
GCGCTGCTCG CGATCGCCGT GCTGCCCGGC CGCTATCGCG CGGTGCTCGC CGAGCGCGAC
ACGTGGGTCA TCATGCTGAT CTACAGCATC ACGTTCGGCG GCTTCGTCGG CATGTCGTCG
TACGTGACGC TGCTGCTGAC GACGCTCTAC CAGATGCCGA AGATCGAAGC GGGCCTGTTC
ATGTCGCTGC TCGCGTTTCT CGGCGCGATC GTGCGCCCGT TCGGCGGCCA CCTCGCCGAC
CGCATCACCG GCGTGCGCGC GCTCATGGCG ATCCTCGCCG CGATCGCCGC GGCCGACTTC
GCGTTCGCGG CCGTGATGCC GCCGCTCGCG GGCGGCATCG CGCTGCTCGT GTGCCTGTAC
GTCGCGTTCG GCCTCGGCAA CGGCTCGACG TTCCAGCTCG TCCCGCACCG CTGGCAGGGC
AAGACGGGCC TGCTGTCCGG CATCGTCGGC GCGGCGGGCG GCATCGGCGG CTTCTATCTG
CCCGTCGTGA TGGGCATCGC GAAGGAAAGC ACGGGCAGCT ATCAGCTCGG CTTCGCGACG
TTCGGCGCGC TCGCGACCTG CGCGCTCGTC GCGCTCGCGA TGCTGCGCGC GCAGTGGCTG
CGCTGGGCGG CGCCCGAGCT CGCCGCGGCC GAGCCGTCGG CGGGCGCCGG GATGCCGATC
GGCGGCGCGG CGCGCGTCGG CGACTGA
|
|---|
| Protein sequence | MDTLRTSLRS GNWRSLLACF LYFDTGFTVW VLYGPLAPFI SKDIAMTAAQ QGFLVAVPVL
AAAILRVTLG NLYQSADGRR IALMGVLLSA LPAAVLPFVP GTPSYTLLLV LGVFLGIGGA
SFAVALPMAG SSYPPKVQGL VLGLAAAGNI GAVLDGFMFP HIAAALDWKF STAAALPLLA
IAGFALFAWA DDRAEKSGSA ARAFGAFVIT LGGLVALVLA VHAGLFGAGK AGVLLLPVMG
ALLAIAVLPG RYRAVLAERD TWVIMLIYSI TFGGFVGMSS YVTLLLTTLY QMPKIEAGLF
MSLLAFLGAI VRPFGGHLAD RITGVRALMA ILAAIAAADF AFAAVMPPLA GGIALLVCLY
VAFGLGNGST FQLVPHRWQG KTGLLSGIVG AAGGIGGFYL PVVMGIAKES TGSYQLGFAT
FGALATCALV ALAMLRAQWL RWAAPELAAA EPSAGAGMPI GGAARVGD
|
|---|
| |