| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3430 |
|---|
| Symbol | gltJ |
|---|
| ID | 4899428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3340639 |
|---|
| End bp | 3341379 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640136656 |
|---|
| Product | glutamate/aspartate ABC transporter, permease protein GltJ |
|---|
| Protein accession | YP_001067667 |
|---|
| Protein GI | 126454005 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTACC ACTGGAACTG GGGCATCTTC CTGAGCCCCG TTTCGACGGG CGAACCGACC
ACCTATCTCG GCTGGCTGAT GTCGGGATTC TGGGTGACGG TCAAGGTGTC GCTCGTCGCG
TGGGTGATCG CGCTCGTCGT CGGGTCGCTG TTCGGCGTGC TGCGCACCGT GCCGAACAAA
TGGCTGTCGG CGATCGGTAC GGTCTACGTA TCGATCTTTC GCAACATTCC GCTCATCGTG
CAGTTCTTCG TCTGGTACCT CGTCGTGCCC GAATTGCTGC CCGTGTCGAT CGGCACCTGG
ATCAAGCAGT TGCCGCCCGG CACGCAATTC TTCACCGCGT CGATCGTCTG TCTCGGCCTC
TTCACGGGCG CGCGCGTCTG CGAGCAGGTG CGCTCCGGCA TCAACGCGCT GCCCAAGGGC
CAGCGCGCGG CCGGCCTCGC GATGGGCTTC ACGCAATGGC AGACGTACCG CTACGTGCTG
CTGCCCGTCG CGTACCGGAT CATCGTGCCG CCGCTCACGT CCGAATTCCT GAACATTTTC
AAGAACTCGG CCGTCGCCTC GACGATCGGT CTGCTCGATC TGTCCGCGCA GGCGCGGCAG
CTCGTCGACT ACACCGCGCA AACGTATGAG TCGTTCATCG CGGTCACGCT CGCGTACGTG
GTGATCAACC TGATCGTGAT GACGTTCATG CGCTGGGTCG AGAGCAAATC CCGGCTGCCC
GGCTACATCG GAGGCAAGTG A
|
|---|
| Protein sequence | MSYHWNWGIF LSPVSTGEPT TYLGWLMSGF WVTVKVSLVA WVIALVVGSL FGVLRTVPNK
WLSAIGTVYV SIFRNIPLIV QFFVWYLVVP ELLPVSIGTW IKQLPPGTQF FTASIVCLGL
FTGARVCEQV RSGINALPKG QRAAGLAMGF TQWQTYRYVL LPVAYRIIVP PLTSEFLNIF
KNSAVASTIG LLDLSAQARQ LVDYTAQTYE SFIAVTLAYV VINLIVMTFM RWVESKSRLP
GYIGGK
|
|---|
| |