| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3396 |
|---|
| Symbol | dusB |
|---|
| ID | 4900332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | + |
|---|
| Start bp | 3314558 |
|---|
| End bp | 3315622 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640136622 |
|---|
| Product | tRNA-dihydrouridine synthase B |
|---|
| Protein accession | YP_001067633 |
|---|
| Protein GI | 126452924 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTCC TAGGCTCTCA CGTCCTGCGC AACAATCTGT TCGTCGCCCC GATGGCGGGC
GTCACGGACC GGCCGTTCCG CCAGCTGTGC AAGCGGCTCG GCGCGGGCTA TGCGGTGTCG
GAGATGGTCG CGTCGAACGC GCAGCTGTGG AAGAGCGAGA AGACGATGCG CCGCGCGAAC
CACGCGGGCG AGGTCGAGCC GATCGCGGTG CAGATCGCGG GCGCCGACCC GGCGATGATG
GCCGAGGCCG CGCGTCACAA CGTCGCGAAC GGCGCGCAGA TCATCGACAT CAACATGGGT
TGCCCGGCGA AGAAGGTCTG CAACGTCGCC GCCGGCTCGG CGCTGCTGCA GAACGAGCCG
CTCGTGCAGC GGATCGTCGA GGCGGTCGTC GGCGCGGTGG GCGCGGGCGC CGACGCCGTG
CCCGTCACGC TGAAGATCCG CACCGGCTGG GACCGCGATC ACAAGAACGC GCTCAGGATC
GCGACGCTCG CCGAGGCGGC CGGCATCTCG ATGCTGACCG TGCACGGCCG CACCCGCGCG
GACCTGTACC GCGGCGACGC CGAATACGAC ACGATCGCGG CCGTGAAAGC CGCCGTGCGC
ATTCCGGTCG TCGCGAACGG CGACATCACG TCGCCGCGAA AGGCGAAGGC CGTGCTCGAC
GCGACGCGCG CCGACGCGCT GATGATCGGC CGCGCCGCGC AAGGAAGGCC GTGGCTCTTC
CGCGAAATCG ATCATTTCCT GCAAAGCGGC GAGCTTCTGC CGCCGCCGCG CATCGACGAG
ATCCGCCAGG TGATGAACGA ACACCTGGAG GATCACTACG CGTTCTACGG CGAATTCACG
GGAGTCCGTA CTGCACGCAA GCACATCGGC TGGTACACTC GCGGCCTTTC CGGCGCGAAC
GGGTTCCGGC ACCGAATGAA CACGCTCGAA ACCACCCGCG AGCAGCTTGC CGCCGTCAAC
GAATTCTTCG ACGCGCAACA GGCGCTGTCC GATCGCCTCG TCTATGTGGA CGACGAAGAC
GGCGACCGCG GCGAGCCGGA CGATTCTAAC CAGTTAGCAG CATGA
|
|---|
| Protein sequence | MPVLGSHVLR NNLFVAPMAG VTDRPFRQLC KRLGAGYAVS EMVASNAQLW KSEKTMRRAN
HAGEVEPIAV QIAGADPAMM AEAARHNVAN GAQIIDINMG CPAKKVCNVA AGSALLQNEP
LVQRIVEAVV GAVGAGADAV PVTLKIRTGW DRDHKNALRI ATLAEAAGIS MLTVHGRTRA
DLYRGDAEYD TIAAVKAAVR IPVVANGDIT SPRKAKAVLD ATRADALMIG RAAQGRPWLF
REIDHFLQSG ELLPPPRIDE IRQVMNEHLE DHYAFYGEFT GVRTARKHIG WYTRGLSGAN
GFRHRMNTLE TTREQLAAVN EFFDAQQALS DRLVYVDDED GDRGEPDDSN QLAA
|
|---|
| |