| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3365 |
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| Symbol | secF |
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| ID | 4902877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | + |
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| Start bp | 3286255 |
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| End bp | 3287205 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640136591 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001067602 |
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| Protein GI | 126455336 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGTT GGTCTTCAAC
GTGGTCTCGC TCGTGACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCATCG CGGGCTGCAT
CTGTCCGTCG AATTCACGGG CGGCACCGTG ATCGAAGTGC AGTACCAGCA GGCCGCGCAG
CTCGAACCCG TGCGCGCGAC GCTCGGCACG CTCGGCTACG CCGACGCGCA GGTGCAGAAC
TTCGGCACGT CGCGCAACGT GCTGATTCGC CTGCCGCTCA AGCAGGGCCT CACGTCCGCG
CAGCAGAGCG ACCAGGTGAT GGCCGCGCTG AAGGCGCAGA ACGCCGACGT CGCGCTGCAG
CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC CGCGAGCTCG CGACCGACGG CCTGCTCGCG
CTCGCGTGCG TCGTGATCGG CATCGTCATC TATCTGTCGT TCCGCTTCGA ATGGAAGTAC
GCGGTCGCCG GCATCATCGC GAACCTGCAC GACGTCGTGA TCATTCTCGG CTTCTTCGCG
TTCTTCCAGT GGGAGTTCTC GCTGTCGGTG CTGGCGGCGG TGCTCGCGGT GCTCGGCTAC
TCGGTCAACG AATCGGTCGT CATCTTCGAC CGGATCCGCG AGACGTTCCG CCGCGAGCGC
AAGATGACGG TGCAGGAAGT GATCAACCAT GCGATCACGA GCACGATGTC GCGCACGATC
ATCACGCACA CGTCGACGGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG
CTGCACTACT TCGCGCTCGC GCTGACGGTC GGCATCATGT TCGGCATCTA TTCGTCGGTG
TTCGTCGCCG GCTCGCTCGC GATGTGGCTC GGCATCAAAC GCGAGGATCT CGTCAAGGAG
AAGAAGTCCG CGCACGATCC GAACGATCCG AACGCGGGCG CGCAGGTGTA A
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| Protein sequence | MEFFRIRKDI PFMRHALVFN VVSLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAQ
LEPVRATLGT LGYADAQVQN FGTSRNVLIR LPLKQGLTSA QQSDQVMAAL KAQNADVALQ
RVEFVGPQVG RELATDGLLA LACVVIGIVI YLSFRFEWKY AVAGIIANLH DVVIILGFFA
FFQWEFSLSV LAAVLAVLGY SVNESVVIFD RIRETFRRER KMTVQEVINH AITSTMSRTI
ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLVKE
KKSAHDPNDP NAGAQV
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