Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3337 |
Symbol | phnD |
ID | 4900581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3260163 |
End bp | 3261158 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640136563 |
Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
Protein accession | YP_001067574 |
Protein GI | 126454619 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein [TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0142532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTGA TCCGCTCTCT CGTCGCCTGC GTGGCCGCGC TCGCGTGCGC CGCCGCCGCC CATGCGCAAA CGCTGAACTT CGGCATCATC TCCACCGATT CGTCGGCGGT GCTCAAGCGC CGCTGGCAAC CGCTCATCGA CGACATGAAC CGCAAGACGG GCCTCGACGT GAAGGCGTTC TTCGCGACCG ACTACGCGGG CATCATCGAG GGCATGCGCT TCAACAAGGT ACAGCTCGGC TACTTCGGCA ACGCGTCGGC GCTCGAGGCG GTCGAGCGCT CGAACGGCGA GGTGTTCGCG AAGCTTCGCC ACGCGAACGG CGAGACCGGC TACTACTCGG TGCTGATCAC GAACGCGAAC AGCCGCTTCA GGACGCTTGA CGACGTGTTC AGGAACCCGA AGGACGTGAC GCTCGGCTTC GGCGATCCGA ACTCGACGTC CGGCACGCTC GTGCCCGCGT ACTATCTGTT CGCGCCGCGC GGCATAGCGC CGCGCACCGC GTTCAGGACG GTGCTGCCGT CGAGCCACGA GGGCAATCTG CTCGCGGTCG TCAACGACAA GATCGACATC GCGACGAACA ACACCGACGT GCTCGGCATG CTGAAGAAGC AGCATCCGGA TCAATACGCG CGGGTGCGCG TGCTGTGGAC ATCGCCGCAG ATCGCATCCG ATCCGCTCGT GTGGCGCAAG GATCTGCCCG ACGCGACCAA GCAGAAGCTG CGCGATTTCT TCTACAACTA CGCGAAGACC GATCCGCACG AGCAGGCGGT AATGGCGGGC ATTCGCAATC TGGTCGGCTT CGCGCCGTCG TCGGATGCGC AACTGATCCC CGTGCGCAAG ATCGTGCTGT TCCAGCAGAA GCAGAAGATC GAGACGGACA TGGCGCTGTC GGCCGATGCG CGCCGCGCGC AGCTCGCGGC GCTCGATGCG AGGCTCGCCG CGCTCGACGC GTCCGGCGCG GCGGATGCGT CGAGCGCGCA GGCGGACAAG CGATGA
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Protein sequence | MKLIRSLVAC VAALACAAAA HAQTLNFGII STDSSAVLKR RWQPLIDDMN RKTGLDVKAF FATDYAGIIE GMRFNKVQLG YFGNASALEA VERSNGEVFA KLRHANGETG YYSVLITNAN SRFRTLDDVF RNPKDVTLGF GDPNSTSGTL VPAYYLFAPR GIAPRTAFRT VLPSSHEGNL LAVVNDKIDI ATNNTDVLGM LKKQHPDQYA RVRVLWTSPQ IASDPLVWRK DLPDATKQKL RDFFYNYAKT DPHEQAVMAG IRNLVGFAPS SDAQLIPVRK IVLFQQKQKI ETDMALSADA RRAQLAALDA RLAALDASGA ADASSAQADK R
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