| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3309 |
|---|
| Symbol | dnaJ |
|---|
| ID | 4901864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009076 |
|---|
| Strand | - |
|---|
| Start bp | 3227496 |
|---|
| End bp | 3228626 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640136535 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | YP_001067546 |
|---|
| Protein GI | 126452366 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC GGGATTACTA CGAGGTTCTG GGCGTCGCGA AGAACGCGAG CGACGACGAA
ATCAAGAAGG CATATCGCAA GCTCGCGATG AAGTACCATC CCGACCGCAA TCCGGACAGC
AAGGATGCGG AGGAGCATTT CAAGGAAGCG AAGGAAGCCT ATGAAATGCT GTCGGACGGC
CAGAAGCGGG CCGCGTACGA CCAGTACGGC CACGCGGGCG TCGATCCGAA CGTGGGGGCG
GCGGGCGCGC AAGGCTTCGG CGGCTTTGCC GATGCGTTCG GCGACATCTT CGGCGACATC
TTCGGCCAGG CGGCGGGCGG CGGCCGCGCG CGCGGCGGCC CGCAGGTGTA TCGCGGCGCG
GACCTGCGCT ACAGCATGGA AATCACGCTC GAGCAGGCGG CGCACGGCTA CGACACGCAA
ATCCGCGTGC CGAGCTGGGC CGCGTGCGGC GTGTGCCACG GCTCGGGCGC GAAGCCGGGC
ACGAAGCCGG AAACCTGCCC GACCTGTCAC GGCCAGGGCA CGGTGCGGAT GTCGCAGGGC
TTCTTCAGCA TCCAGCAGAC CTGCCCGAAG TGCCACGGCA CCGGCACCTA CATTCCGGAG
CCATGCGCGC ACTGCCACGG CTCGGGCAAG GTGAAGGAAA CCAAGACGCT CGAAGTGAAG
ATCCCGGCGG GCATCGACGA CGGCATGCGG ATCCGCTCGG CCGGCAACGG CGAGCCGGGC
ATCAACGGCG GGCCGTCCGG CGATCTGTAC GTCGAGATCC ATATCAAGCC GCACGCGGTG
TTCGAGCGCG ACGGCGACGA TCTGCACTGC CAGATGCCGA TTCCGTTCAC GACGGCCGCG
CTGGGCGGCG AGATCGAAGT GCCGACGCTC GCCGGACGCG CGTCGTTCAC GGTGCCCGAA
GGCACGCAGT CGGGCAAGAC GTTCCGCCTG CGCGGCAAGG GCATCAAGGG GCTGCGCTCG
AGCATCGCGG GCGATCTGTA CGTGCACGTG CAGGTCGAGA CGCCCGTGAA GCTCACCGAT
CAGCAGCGCG ATCTGCTCAA GCAGTTCGAG AAGTCGCTCG CGGAAGGCGG CCCGCGTCAC
AGCCCGCAGA GCAAGAGCTG GTTCGACCGC GTGAAGAGCT TCTTCGAGTG A
|
|---|
| Protein sequence | MAKRDYYEVL GVAKNASDDE IKKAYRKLAM KYHPDRNPDS KDAEEHFKEA KEAYEMLSDG
QKRAAYDQYG HAGVDPNVGA AGAQGFGGFA DAFGDIFGDI FGQAAGGGRA RGGPQVYRGA
DLRYSMEITL EQAAHGYDTQ IRVPSWAACG VCHGSGAKPG TKPETCPTCH GQGTVRMSQG
FFSIQQTCPK CHGTGTYIPE PCAHCHGSGK VKETKTLEVK IPAGIDDGMR IRSAGNGEPG
INGGPSGDLY VEIHIKPHAV FERDGDDLHC QMPIPFTTAA LGGEIEVPTL AGRASFTVPE
GTQSGKTFRL RGKGIKGLRS SIAGDLYVHV QVETPVKLTD QQRDLLKQFE KSLAEGGPRH
SPQSKSWFDR VKSFFE
|
|---|
| |