Gene BURPS1106A_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_3296 
Symbol 
ID4900347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009076 
Strand- 
Start bp3214217 
End bp3214897 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID640136522 
ProductDedA family membrane protein 
Protein accessionYP_001067533 
Protein GI126454832 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0603316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAACGC TGCTTCATTT CGTCAGCCTC GTCGTGCACA TCGATGCATT TCTCGGCGAT 
TTCATCCGGC AGTACGGCGC CTGGGTCTAT CTGGTGCTGT TCCTGATCGT TTTCTGCGAA 
ACGGGGCTCG TGATCTTCCC GTTCCTGCCG GGCGATTCGC TGCTCTTCAT CGCGGGCGCG 
TTCGCGGCGA CGGGCGAAAT GACGCTTGCG GGCCTCCTCG TGCTGCTGCT CGTCGCGGCG 
GTGGGCGGCA ATACGGTCAA CTATCTGATC GGCCGCGCGA TCGGGCCGAA GGTCTTCAAT 
ACGCACATTC CGGGGCTCGA ACGCTTCCTC GACCGCGCCG CGCTGCAGAA GACCCACAAT 
TTCTACGAGC GGCACGGCGG CAAGACGCTC GTGCTCGCGC GCTTCATCCC GGTCGTGCGC 
ACGTTCGCGC CGTTCGTCGC GGGCGCCTCG GCGATGAGCG TCGCGCGCTT TCAGTTGTTC 
AACGTGATCG GCGCGCTGAT CTGGGTGCTG CTCCTCGTCT TTCTCGGCTA CTTCTTCGGC 
AACATCCCGT TCATTCGTCA TTACCTGAAC GTGATCGTGC TCGTCGGGAT CGGCGCGGCA 
GTGATCCCCG TCGCGCTCGG CGCGCTATGG AAGCTGCTGC GCCGCAAGTC GGACGCGCGA 
AAGACGCAGG CGAATCGCTG A
 
Protein sequence
METLLHFVSL VVHIDAFLGD FIRQYGAWVY LVLFLIVFCE TGLVIFPFLP GDSLLFIAGA 
FAATGEMTLA GLLVLLLVAA VGGNTVNYLI GRAIGPKVFN THIPGLERFL DRAALQKTHN 
FYERHGGKTL VLARFIPVVR TFAPFVAGAS AMSVARFQLF NVIGALIWVL LLVFLGYFFG 
NIPFIRHYLN VIVLVGIGAA VIPVALGALW KLLRRKSDAR KTQANR