Gene BURPS1106A_3277 details

Gene Information

• Locus tag: BURPS1106A_3277
• Symbol: gmhA
• ID: 4902327
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: -
• Start bp: 3192353
• End bp: 3192931
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640136503
• Product: phosphoheptose isomerase
• Protein accession: YP_001067514
• Protein GI: 126453797
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0279] Phosphoheptose isomerase
• TIGRFAM ID: [TIGR00441] phosphoheptose isomerase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACGTACA TCACGAACAG CATCGCCGAG GCCCAGCGGG TAATGGCCGC GATGCTGGCA 
GACGAACGGT TGCTTGCGAC GGTTCAGAAA GTTGCCGATG CCTGCATTGC GTCCATCGCT 
CAAGGCGGCA AGGTATTGCT CGCCGGTAAC GGCGGAAGCG CGGCTGATGC GCAGCATATC 
GCAGGGGAGT TCGTCAGCCG GTTTGCTTTC GATCGGCCCG GGCTGCCGGC AGTGGCGTTG 
ACGACGGACA CGTCCATTCT CACGGCGATC GGAAACGATT ACGGCTACGA GAAACTGTTT 
TCCCGTCAGG TTCAGGCGCT CGGCAACAAG GGCGACGTGC TGATCGGTTA TTCGACTTCC 
GGAAAGTCCC CGAACATACT GGCGGCTTTT CGCGAAGCCA AGGCAAAGGG GATGACGTGC 
GTCGGCTTCA CCGGCAATCG CGGCGGAGAA ATGCGCGAGC TGTGCGACTT GCTGCTCGAA 
GTCCCGTCGG CCGACACCCC GAAGATCCAG GAGGGGCACC TGGTTCTCGG ACATATCGTT 
TGCGGGCTGG TCGAGCACTC CATTTTCGGG AAGCAGTGA 

 

Protein sequence

MTYITNSIAE AQRVMAAMLA DERLLATVQK VADACIASIA QGGKVLLAGN GGSAADAQHI 
AGEFVSRFAF DRPGLPAVAL TTDTSILTAI GNDYGYEKLF SRQVQALGNK GDVLIGYSTS 
GKSPNILAAF REAKAKGMTC VGFTGNRGGE MRELCDLLLE VPSADTPKIQ EGHLVLGHIV 
CGLVEHSIFG KQ