Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3260 |
Symbol | |
ID | 4901866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3168465 |
End bp | 3169733 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640136486 |
Product | polysaccharide biosynthesis/export protein |
Protein accession | YP_001067497 |
Protein GI | 126451879 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.14085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGCCGT TCGTGCGGCG CTTGCGGCCG GAACCGGCCG GAACGAGAAA ATCGATAGAG GTGTGGATGG GTAGTCTGGG GGAAGCAGGC GGCATCGCGC CGCCGAAGCG CACGTGCGGC GCGCGCGTGC GTCGGCTGAT GAAGCGGGTG ACGCTGTGCG CGGCGCTTGC GGCATTGAGC GCGTGCGGCG TCGCGCCCGG CATGCGGATG AAACAGCCGG CGAACGTGCC GGTGTCGAGC GCGGCAGCGG ACGCGCCGGC CGAGGCCGGA CGCAAGCCGC GCGGCGAGCA GCTGCCGGTG CCGATCACCG ACATCGATCT GAGCCTGATC CGGACGCTGC GCGATGCGCA ACAGGCGCCG CGCCGCGCGG CCGATCTCGT ATCGCCGGCG TCGGGCTATA CGATCGGGCG CGGCGACGTG CTGCAGATCA CGGTCTGGGA CCACCCCGAG CTCGCGGCGG CGCTCGGCAC GCAGCAGCAG ACGGCGGCGC GCGCGGCCGA TGCGCCGGCG GGCTTCGTCG TCGATCAGGA CGGCACGCTC CAGTACCCGT ACGTCGGGCG CATCGCGGTG GCGGGCCTGA AGCCGGAACA GGTTCAGGCG CGGCTCGCGC GCCAGCTCGC GCAGACGTTT CGCGATCCGC AGGTGACGGT GCGCATCGCA TCGTTTCGCG CGAAGCAGGT CTACATCGAA GGCGAGGTGC ATACGCCCGG TTCGCAGGCG CTCAACGACA TCCCGATGAC GCTGTACGAC GCGGTGAGCC GCGCGGGCGG CTTCTCGGCG AGCGCGGACC AGCGGCGCGT GACGCTCGTG CGCGACGGCG TCGAACGAAG GCTCGATCTG TCGGGCGCTG CACAGGGCAT CAATCCGTCA CGGATCGTGC TGCGCGACGG CGATTTGCTG CGCATTCCGC CGCGCGACGA AAGCGGCGTG TTCGTGATGG GCGAGGTCAA CCGGCCCGTC ACCGCGCTGC CGATGCGCAA CGGCCGCCTG ACGCTGAGCG AGGCGCTGTC GCAGGCCGGC AGCCTGAACG CGACGACGGC CGACGCCGCG CAACTGTATG TGATTCGCGG CTCGCTCGAC GCGAAGCCGC ACGTTTATCG GCTCGACGCG AGCTCGCCCG TCGCGATGGT GCTCGCGAAC CAGTTCGAGC TGGAGCCGAA GGACATCGTC TATGTCGACG GCAACGGCCT CGTGCGCTTC AGCCGCGTGC TCAGCCTGTT GCTGCCGGCC GTCAACGCCG GCCTGACCGC GGCGGTCGTG ACCAAATGA
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Protein sequence | MKPFVRRLRP EPAGTRKSIE VWMGSLGEAG GIAPPKRTCG ARVRRLMKRV TLCAALAALS ACGVAPGMRM KQPANVPVSS AAADAPAEAG RKPRGEQLPV PITDIDLSLI RTLRDAQQAP RRAADLVSPA SGYTIGRGDV LQITVWDHPE LAAALGTQQQ TAARAADAPA GFVVDQDGTL QYPYVGRIAV AGLKPEQVQA RLARQLAQTF RDPQVTVRIA SFRAKQVYIE GEVHTPGSQA LNDIPMTLYD AVSRAGGFSA SADQRRVTLV RDGVERRLDL SGAAQGINPS RIVLRDGDLL RIPPRDESGV FVMGEVNRPV TALPMRNGRL TLSEALSQAG SLNATTADAA QLYVIRGSLD AKPHVYRLDA SSPVAMVLAN QFELEPKDIV YVDGNGLVRF SRVLSLLLPA VNAGLTAAVV TK
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