Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_3251 |
Symbol | kdsA |
ID | 4903271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009076 |
Strand | - |
Start bp | 3159620 |
End bp | 3160465 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640136477 |
Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
Protein accession | YP_001067488 |
Protein GI | 126454862 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.325854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGTAG CAATCAGCCC CGGCGTCACG GCCGGCAACA GCCTGCCTTT CGTGCTGTTC GGCGGGATCA ACGTGCTCGA GAGTCTCGAC TTCACGCTCG ACGTGTGCGG CGAATACGTC GCGGTGACGC GCAAGCTCGG CATTCCGTTC GTGTTCAAGG CGTCGTTCGA CAAGGCGAAC CGCTCGTCGA TCCATTCGTA TCGCGGCGTC GGGCTCGACG AAGGCCTGAA GATCTTCGCC GAGGTGAAGG CGCGCTTCGG CGTGCCGGTG ATCACCGATG TGCACGAAGT CGAGCAGGCG GCGCCCGTGG CCGAAATCGC CGACGTGTTG CAGGTGCCCG CGTTTCTCGC GCGGCAGACC GATCTCGTCG TCGCGATCGC GAAGGCCGGC AAGCCGGTGA ACGTGAAGAA GCCGCAGTTC ATGAGCCCCA CGCAATTGAA GCACGTGGTG TCGAAATGCG GCGAGGTCGG CAACGATCGC GTGATGCTGT GCGAGCGCGG CAGTTCGTTC GGCTACGACA ATCTCGTCGT GGACATGCTC GGCTTCCGGC AGATGGCCGA GACGACGGGC GGTTGCCCGG TGATCTTCGA CGTCACGCAC AGCCTGCAGT GCCGCGATCC GCTCGGCGAC GCGTCGGGCG GCCGGCGCCG GCAAGTGCTC GATCTCGCGC GCGCGGGCAT CGCGGTCGGC ATCGCGGGGC TCTTTCTCGA GGCGCACCCC GATCCCGACC GCGCGCGCTG CGATGGGCCG AGCGCGCTGC CGTTGCATCA GCTCGAGGGC TTCCTGTCGC AGATGAAGGC GATCGACGAT CTCGTCAAGC GCATGCCGGC GCTCGAGATT CGATGA
|
Protein sequence | MNVAISPGVT AGNSLPFVLF GGINVLESLD FTLDVCGEYV AVTRKLGIPF VFKASFDKAN RSSIHSYRGV GLDEGLKIFA EVKARFGVPV ITDVHEVEQA APVAEIADVL QVPAFLARQT DLVVAIAKAG KPVNVKKPQF MSPTQLKHVV SKCGEVGNDR VMLCERGSSF GYDNLVVDML GFRQMAETTG GCPVIFDVTH SLQCRDPLGD ASGGRRRQVL DLARAGIAVG IAGLFLEAHP DPDRARCDGP SALPLHQLEG FLSQMKAIDD LVKRMPALEI R
|
| |