Gene BURPS1106A_3239 details

Gene Information

• Locus tag: BURPS1106A_3239
• Symbol: tolR
• ID: 4900448
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009076
• Strand: +
• Start bp: 3151005
• End bp: 3151454
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640136465
• Product: TolR protein
• Protein accession: YP_001067477
• Protein GI: 126453667
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02801] TolR protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0826525
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGCA CCCCCATTCG TTCCAGCATG CGCGGCGGCC GCTCGCGCCG CTCGATGGCC 
GACATCAACG TCGTCCCCTA CATCGACGTG ATGCTCGTGC TGCTCGTCAT CTTCATGGTG 
ACGGCGCCCC TCGTCGCGCC GTCGATCGTC AATCTGCCGA CCGTCGGCAA CGCCGCGCCG 
CAAGAGCAGA CGCCGCCCGT CGTCGTCAAC ATCCAGGCCG ACGGCAAGAT CAGCGTCCGC 
TACAAGGGCG ATTCGGGCGC GTCGCAGGAA GACACGATGA CGAAGGCCGA GCTCGACGGC 
TTCATCGCCG CGCGCCAGGC CGACCACCCG GATCAGCCCG TCGTGATCGC AGCCGACAAG 
ACGGTTCAAT ATGACGCGGT GATGACCGTA ATGTCCGATC TGAAGGCGCG CGGCGTGAAG 
CGCGTCGGCC TGCTCGTCAA ATCGCAATGA 

 

Protein sequence

MAGTPIRSSM RGGRSRRSMA DINVVPYIDV MLVLLVIFMV TAPLVAPSIV NLPTVGNAAP 
QEQTPPVVVN IQADGKISVR YKGDSGASQE DTMTKAELDG FIAARQADHP DQPVVIAADK 
TVQYDAVMTV MSDLKARGVK RVGLLVKSQ