| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_3230 |
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| Symbol | |
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| ID | 4900189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009076 |
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| Strand | - |
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| Start bp | 3144683 |
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| End bp | 3145468 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640136456 |
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| Product | putative type IV pilus protein |
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| Protein accession | YP_001067468 |
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| Protein GI | 126452300 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGCA CGACCCGTTG GCGCGCGCAT ACGCTGGTCG AGGTGATGAT CGCGATGGCG
CTCGGCTTGC TGATTTTGCT TGCCGCCATG TCGCTCTATC GCGTGCAGCG GGCTGCTTAT
TCAGCGGCGG TGGATGCCGC GCGCTTGCGC GACGCGGCGC AGGCGGCGCT CGCGCTGATC
TCGCAGCAGA TCCAGATGGC GGGCTTCGTG CCGCTCGATG CATACGATGC CCGCGCGGTG
CCGGGGCTGT TCGGCTGTGC GGCGGGACGT CCGGTCGGCG CGGACGGTCA GACCGCATGC
GATCCGCTCG CGAGCCGCTC CGACGGCCTC GTCGTCCGCT ATGTCGGAGA CGGCGTCTCC
ACATGGCCGA CGGCGAGCGG GCAGCCGACG GACTGCCTCG GCCAGGGCGT CGGCGCGGCC
GATACGCAGC CGCTGATCGT CAACCGCTTT TACGCGCGCG TCAGCGCGTC GACGGGCGAA
CCGGAACTGT ACTGCGAAGG CAGCGGCAGA CCCGGCATCG CGCAGCCGCT TGTCGAAGGC
GTCGAACGCT TGAGTTTGCG CTATCGACTA TATGGTGCTG CACGATGGGC CGACGCGTCG
GCCTTGTCTG TCGACGACTG GGCCAATGTG GCGGTCGTTT CCGTCTGCGT GCAAGTGCGA
GGCAGGCGCA CGGGGCGCCC GGCGCGGTAT GTCGACTGCG AAGGGCGAGT GGCGAGCGCA
CCCGACACCC GCGCGAGACT GGCGTGGCGG CGCTATGTGG CGGTCCGTAA CCGAGCCGGC
ACATGA
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| Protein sequence | MMRTTRWRAH TLVEVMIAMA LGLLILLAAM SLYRVQRAAY SAAVDAARLR DAAQAALALI
SQQIQMAGFV PLDAYDARAV PGLFGCAAGR PVGADGQTAC DPLASRSDGL VVRYVGDGVS
TWPTASGQPT DCLGQGVGAA DTQPLIVNRF YARVSASTGE PELYCEGSGR PGIAQPLVEG
VERLSLRYRL YGAARWADAS ALSVDDWANV AVVSVCVQVR GRRTGRPARY VDCEGRVASA
PDTRARLAWR RYVAVRNRAG T
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